RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CHSY1Q86X52 802 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 GATAD2AQ86YP4 633 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 DCP2Q8IU60 420 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 SLC25A45Q8N413 288 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 C1orf131Q8NDD1 294 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 HNRNPLLQ8WVV9 542 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 OR8D1Q8WZ84 308 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 GRAMD1AQ96CP6 724 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 HDAC8Q9BY41 377 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 INTS2Q9H0H0 1204 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 GDPD2Q9HCC8 539 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 AASDHPPTQ9NRN7 309 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 ARHGEF38Q9NXL2 777 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 SARDHQ9UL12 918 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 DOCK9Q9BZ29 2069 aa11.53□□□□□ -0.56
CLSTN3-206ENST00000535668 TLN1Q9Y490 2541 aaKnown RBP11.52□□□□□ -0.56
CLSTN3-206ENST00000535668 TBC1D3DA0A087WVF3 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3IA0A087WXS9 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3EA0A087X179 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3KA0A087X1G2 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 GOLGA6L4A6NEF3 574 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3FA6NER0 549 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3LB9A6J9 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 C1QTNF3-AMACRE9PGA6 284 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 PLK4O00444 970 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 FGFR1OPO95684 399 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 IL1BP01584 269 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3HP0C7X1 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 CKMT1AP12532 417 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 GNA15P30679 374 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 NOS2P35228 1153 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 ABCG1P45844 678 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 GABRB2P47870 512 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 PSMD8P48556 350 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 CXCR3P49682 368 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 STK19P49842 368 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 PITX1P78337 314 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 SLC20A2Q08357 652 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TARDBPQ13148 414 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 DLG2Q15700 870 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 BRMS1LQ5PSV4 323 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3GQ6DHY5 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3CQ6IPX1 549 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 TBC1D3Q8IZP1 549 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 OR2A12Q8NGT7 310 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 OR4C6Q8NH72 309 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 ADAM32Q8TC27 787 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 GANCQ8TET4 914 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 NELFBQ8WX92 580 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 ASB12Q8WXK4 309 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 FGF11Q92914 225 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 HIC2Q96JB3 615 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 RPL10LQ96L21 214 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 CPXM1Q96SM3 734 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 NPY6RQ99463 290 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 C2orf49Q9BVC5 232 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 ST7Q9NRC1 585 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 APEX2Q9UBZ4 518 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 ZNF212Q9UDV6 495 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 HS3ST3A1Q9Y663 406 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 MYLKQ15746 1914 aa11.52□□□□□ -0.57
CLSTN3-206ENST00000535668 DOCK4Q8N1I0 1966 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 CHD5Q8TDI0 1954 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 FAM149AA5PLN7 773 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 CAPN8A6NHC0 703 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 PIK3R2O00459 728 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 TLX3O43711 291 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 RTN2O75298 545 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 LETM1O95202 739 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 F9P00740 461 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 PDGFRAP16234 1089 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 INSM1Q01101 510 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 CNTN1Q12860 1018 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 BNIP3Q12983 259 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 PAK1Q13153 545 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 ZNF177Q13360 481 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 STAT4Q14765 748 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 TAF5Q15542 800 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 ZNF284Q2VY69 593 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 HES3Q5TGS1 186 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 OTUD1Q5VV17 481 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 DPY19L2P1Q6NXN4 242 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 C11orf57Q6ZUT1 292 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 HORMAD1Q86X24 394 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 DEFB106AQ8N104 65 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 EID2Q8N6I1 236 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 DCAF4L2Q8NA75 395 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 OR52K2Q8NGK3 314 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 PIP4K2CQ8TBX8 421 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 NOX5Q96PH1 765 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 CEP44Q9C0F1 390 aa11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-206ENST00000535668 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms