RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 LGALS2P05162 132 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 SERPINF2P08697 491 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 PIK3R1P27986 724 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 FAAP100Q0VG06 881 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 ATAD3BQ5T9A4 648 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 STK32CQ86UX6 486 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 STX12Q86Y82 276 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 FEM1CQ96JP0 617 aa12.83□□□□□ -0.36
SPG11-203ENST00000535302 ZC3H13Q5T200 1668 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 MAGEA13PA6NCF6 341 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 TNFRSF21O75509 655 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 POU5F1Q01860 360 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 RBM23Q86U06 439 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 FBXO39Q8N4B4 442 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 TMEM159Q96B96 161 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 CLEC4MQ9H2X3 399 aaPredicted RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 ADAM30Q9UKF2 790 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 SNTNA6NMZ2 147 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 CLPTM1O96005 669 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 TPBGLP0DKB5 382 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 NPY2RP49146 381 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 ULK2Q8IYT8 1036 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 ATP6V1C2Q8NEY4 427 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 WDR41Q9HAD4 459 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 RPRD1BQ9NQG5 326 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 WBP11Q9Y2W2 641 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 ZBTB11O95625 1053 aaPredicted RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 RBP1P09455 135 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 MYBPC1Q00872 1141 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 EID3Q8N140 333 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 CYP3A43Q9HB55 503 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 NINJ2Q9NZG7 142 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 ANAPC2Q9UJX6 822 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 RBAK-RBAKDNI3L0D1 243 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 MYL12AP19105 171 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 PPP2R1BP30154 601 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 CACNA2D1P54289 1103 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 CDC73Q6P1J9 531 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 KCNT2Q6UVM3 1135 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 CCDC126Q96EE4 140 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 NCKIPSDQ9NZQ3 722 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 EFCAB10A6NFE3 127 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 PLA2G4EQ3MJ16 856 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 PAPD7Q5XG87 772 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 TAF2Q6P1X5 1199 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 FRMD8P1Q9BZ68 369 aaPredicted RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 KIAA1683Q9H0B3 1180 aa12.82□□□□□ -0.36
SPG11-203ENST00000535302 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
SPG11-203ENST00000535302 SCAMP1O15126 338 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 GUCY1B2O75343 617 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 AMHP03971 560 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 GZMAP12544 262 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 AKR1A1P14550 325 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 CYP2A7P20853 494 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 HK2P52789 917 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 CLVS1Q8IUQ0 354 aaPredicted RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 COLGALT2Q8IYK4 626 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 KIAA0319LQ8IZA0 1049 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 HIC2Q96JB3 615 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 PCDH12Q9NPG4 1184 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 PEX5P50542 639 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 CDH17Q12864 832 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 FASTKQ14296 549 aaKnown RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 CDKAL1Q5VV42 579 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 MCUBQ9NWR8 336 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 VEGFAP15692 232 aaPredicted RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 IL27RAQ6UWB1 636 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 SLC16A10Q8TF71 515 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 LRRC39Q96DD0 335 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 PGAM1P18669 254 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 SLC6A3Q01959 620 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 PUDPQ08623 228 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 ZC3H12AQ5D1E8 599 aaKnown RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 DENND1CQ8IV53 801 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 ELOA2Q8IYF1 753 aaPredicted RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 CAPSLQ8WWF8 208 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 DUSP9Q99956 384 aaKnown RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 FRMD8Q9BZ67 464 aaPredicted RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 TRPV2Q9Y5S1 764 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 A0A096LPK6 155 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 CLDN5O00501 218 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 CES2O00748 559 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 FFAR3O14843 346 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 MYL12BO14950 172 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 GPR42O15529 346 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 MPOP05164 745 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 PIRTP0C851 137 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 ABL2P42684 1182 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 ATP13A4Q4VNC1 1196 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 ILDR1Q86SU0 546 aaPredicted RBP12.81□□□□□ -0.36
SPG11-203ENST00000535302 GPR156Q8NFN8 814 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 SH3D21A4FU49 640 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 TAF4O00268 1085 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 BCL10O95999 233 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 PSMB4P28070 264 aa12.81□□□□□ -0.36
SPG11-203ENST00000535302 IL12RB1P42701 662 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms