RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 TMEM248Q9NWD8 314 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 IP6K2Q9UHH9 426 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 VPS51Q9UID3 782 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 SCML1Q9UN30 329 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 OR51B4Q9Y5P0 310 aa13.71□□□□□ -0.21
CAPN1-227ENST00000533909 CKAP5Q14008 2032 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 BCLAF3A2AJT9 711 aaKnown RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 MYO1FO00160 1098 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 EEF2KO00418 725 aaKnown RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 FGF10O15520 208 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 SNAP91O60641 907 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 ADH1BP00325 375 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 CYP1A2P05177 515 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 H2AFZP0C0S5 128 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 MIPP30301 263 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 HTR7P34969 479 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 PTGER3P43115 390 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 CLCN6P51797 869 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF75DP51815 510 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 GALCP54803 685 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 GEMIN4P57678 1058 aaKnown RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 ACAP1Q15027 740 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 POLD3Q15054 466 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 DLG2Q15700 870 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 AASDHQ4L235 1098 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 PPP6R3Q5H9R7 873 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 WDR45BQ5MNZ6 344 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 ERMARDQ5T6L9 678 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 C9orf64Q5T6V5 341 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 MANEALQ5VSG8 457 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 LINGO4Q6UY18 593 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 H2AFVQ71UI9 128 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 MMAAQ8IVH4 418 aaKnown RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 STK40Q8N2I9 435 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 SH2D3CQ8N5H7 860 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 MYO19Q96H55 970 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 HSPA12BQ96MM6 686 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 GPR174Q9BXC1 333 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 MAGEH1Q9H213 219 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 NHEJ1Q9H9Q4 299 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 GPATCH2LQ9NWQ4 482 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 USP36Q9P275 1121 aaKnown RBP13.7□□□□□ -0.22
CAPN1-227ENST00000533909 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 THADAQ6YHU6 1953 aa13.7□□□□□ -0.22
CAPN1-227ENST00000533909 MUC22E2RYF6 1773 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 PRR5-ARHGAP8B1AHC4 643 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 ATP9BO43861 1147 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 LRCH4O75427 683 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 RNASEH2AO75792 299 aaKnown RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 PCK1P35558 622 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 DNA2P51530 1060 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 ARHGAP8P85298 464 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF33AQ06730 810 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 SLC20A2Q08357 652 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 CST6Q15828 149 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 FAM46CQ5VWP2 391 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 PRR23CQ6ZRP0 262 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 Q6ZVU0 165 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 RABEPKQ7Z6M1 372 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 SYT12Q8IV01 421 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 PSTKQ8IV42 348 aaKnown RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 RTL3Q8N8U3 475 aaKnown RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF564Q8TBZ8 553 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 PSMB7Q99436 277 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 SNRNP25Q9BV90 132 aaKnown RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 MAGEB5Q9BZ81 275 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 BTBD1Q9H0C5 482 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 PABPC3Q9H361 631 aaKnown RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 ZWILCHQ9H900 591 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 CD93Q9NPY3 652 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 FBXL12Q9NXK8 326 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 WSB2Q9NYS7 404 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-227ENST00000533909 UVRAGQ9P2Y5 699 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 GON4LQ3T8J9 2241 aa13.69□□□□□ -0.22
CAPN1-227ENST00000533909 RALGAPA1Q6GYQ0 2036 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 KHNYNO15037 678 aaKnown RBP13.68□□□□□ -0.22
CAPN1-227ENST00000533909 MID1O15344 667 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 MT-CO1P00395 513 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 CFIP05156 583 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF806P0C7X5 589 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SRCP12931 536 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 VAV1P15498 845 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SDHBP21912 280 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ITPKAP23677 461 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SLC8A1P32418 973 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ACVRL1P37023 503 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ARL4AP40617 200 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF135P52742 658 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SF3A2Q15428 464 aaKnown RBP13.68□□□□□ -0.22
CAPN1-227ENST00000533909 HADHQ16836 314 aaKnown RBP13.68□□□□□ -0.22
CAPN1-227ENST00000533909 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 USP30Q70CQ3 517 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 NLRP14Q86W24 1093 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 RYBPQ8N488 228 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms