RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ATG16L2Q8NAA4 619 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 FBXO22Q8NEZ5 403 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 SPPL2AQ8TCT8 520 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 HAS1Q92839 578 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 COL26A1Q96A83 441 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 TMEM120AQ9BXJ8 343 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 TMBIM4Q9HC24 238 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 STARD13Q9Y3M8 1113 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 ADGRB1O14514 1584 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 A0A087X0B3 334 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 ZSCAN5CA6NGD5 496 aaPredicted RBP6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 TLR5O60602 858 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 NOS3P29474 1203 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 SSTR1P30872 391 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF143P52747 638 aaPredicted RBP6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 DUSP4Q13115 394 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 NAB1Q13506 487 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 PKN2Q16513 984 aaKnown RBP6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 NT5DC1Q5TFE4 455 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 PSTKQ8IV42 348 aaKnown RBP6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 KATNAL2Q8IYT4 538 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 KAT5Q92993 513 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 KCTD14Q9BQ13 255 aaPredicted RBP6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 SEMA4AQ9H3S1 761 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 PRKAG3Q9UGI9 489 aa6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 DMGDHQ9UI17 866 aaKnown RBP6.49□□□□□ -1.37
UBQLN1-206ENST00000533705 SMIM35A0A1B0GVV1 85 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ZBTB48P10074 688 aaPredicted RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 PABPC1P11940 636 aaKnown RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ITGB5P18084 799 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 DEFA1P59665 94 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 DEFA3P59666 94 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 IRF8Q02556 426 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TRAF2Q12933 501 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TUSC3Q13454 348 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CRYMQ14894 314 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 RASA2Q15283 850 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 PCID2Q5JVF3 399 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CYP4Z2PQ8N1L4 340 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF786Q8N393 782 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 LRRC52Q8N7C0 313 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 EPS8L1Q8TE68 723 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TRPC4APQ8TEL6 797 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ANKRD49Q8WVL7 239 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ARNTL2Q8WYA1 636 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TSPAN18Q96SJ8 248 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 IL22Q9GZX6 179 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 VTI1BQ9UEU0 232 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ATP6V1HQ9UI12 483 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TAGLN3Q9UI15 199 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 A0A0A0MRY4 1105 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 NEDD8-MDP1E9PL57 170 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CLDN5O00501 218 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CCL16O15467 120 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CALCAP01258 141 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 MMP3P08254 477 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ANXA5P08758 320 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CXCR2P25025 360 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 PCYT1AP49585 367 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 DPYSL3Q14195 570 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 EEF1DP3Q658K8 133 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 LRRC49Q8IUZ0 686 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 FAM126BQ8IXS8 530 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 STARD8Q92502 1023 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 USP6NLQ92738 828 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 UBE2E3Q969T4 207 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 MTFMTQ96DP5 389 aaKnown RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 SPATA13Q96N96 652 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 HGH1Q9BTY7 390 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 BPIFA1Q9NP55 256 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 COMMD8Q9NX08 183 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.48□□□□□ -1.373e-7■■■■□ 23.4
UBQLN1-206ENST00000533705 PSME2Q9UL46 239 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 KLHL20Q9Y2M5 609 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 N6AMT1Q9Y5N5 214 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 RIC1Q4ADV7 1423 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 A0A0B4J269 797 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 SMIM22K7EJ46 135 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 RGS14O43566 566 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 TLX1P31314 330 aaPredicted RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 HPCAL1P37235 193 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 SLC1A6P48664 564 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CASP5P51878 434 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 RAD23AP54725 363 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 MRPS15P82914 257 aaKnown RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 SPIDRQ14159 915 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 NCF4Q15080 339 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ATL1Q8WXF7 558 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 OR8D1Q8WZ84 308 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 NACC2Q96BF6 587 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 LRRC39Q96DD0 335 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 CATSPER2Q96P56 530 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 ASB2Q96Q27 587 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 NXF3Q9H4D5 531 aaKnown RBP6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 HAO1Q9UJM8 370 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 PCDHB9Q9Y5E1 797 aa6.48□□□□□ -1.37
UBQLN1-206ENST00000533705 RPTORQ8N122 1335 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms