RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 LRRC19Q9H756 370 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ANO2Q9NQ90 1003 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ABI2Q9NYB9 513 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 ORC3Q9UBD5 711 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 SALL4Q9UJQ4 1053 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ITM2BQ9Y287 266 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 PRAMEF33A0A0G2JMD5 474 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 A0A1W2PQH9 124 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 TRIM49BA6NDI0 452 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 TPP1O14773 563 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 CLDN3O15551 220 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 SRGAP2BP0DMP2 458 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 HGFP14210 728 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ATP2B1P20020 1258 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 CLCN1P35523 988 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZNF76P36508 570 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ABCG1P45844 678 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 SEC13P55735 322 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 CLDN2P57739 230 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 NFE2Q16621 373 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 EMC4Q5J8M3 183 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 FAM26FQ5R3K3 315 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 BLOC1S2Q6QNY1 142 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 LCLAT1Q6UWP7 414 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 CYP2U1Q7Z449 544 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 GRAMD1CQ8IYS0 662 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 TMEM86AQ8N2M4 240 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 OR6B3Q8NGW1 331 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 RBM15Q96T37 977 aaKnown RBP eCLIP1.78□□□□□ -2.12
KNL1-211ENST00000533001 C7orf25Q9BPX7 421 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 HERPUD2Q9BSE4 406 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 DPH1Q9BZG8 443 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ENKD1Q9H0I2 346 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 PLEKHB1Q9UF11 243 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 TUBD1Q9UJT1 453 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 AGO2Q9UKV8 859 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 SRPRBQ9Y5M8 271 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 CSNK1G3Q9Y6M4 447 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 D6RAR5 112 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MASP2O00187 686 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 AGRPO00253 132 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 AP1G1O43747 822 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 PAX3P23760 479 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 NDST1P52848 882 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 UBE2IP63279 158 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 EFHC2Q5JST6 749 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 KYAT3Q6YP21 454 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 TECPR1Q7Z6L1 1165 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MARVELD2Q8N4S9 558 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 CEP76Q8TAP6 659 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 OR1E3Q8WZA6 343 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 PYM1Q9BRP8 204 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 TIPINQ9BVW5 301 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 SP110Q9HB58 689 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 SPATS2LQ9NUQ6 558 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 TLR4O00206 839 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 PPM1DO15297 605 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 IRAK2O43187 625 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MTSS1O43312 755 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 HTRA2O43464 458 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 TJP3O95049 919 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MT-CO3P00414 261 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MMP2P08253 660 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MSL3P1P0C860 447 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MLLT3P42568 568 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 FASLGP48023 281 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 RPL6Q02878 288 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZBTB16Q05516 673 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 Q0VFX4 171 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 GRSF1Q12849 480 aaKnown RBP eCLIP1.78□□□□□ -2.12
KNL1-211ENST00000533001 CUL4BQ13620 913 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 SLC39A14Q15043 492 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MS4A13Q5J8X5 152 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 DIEXFQ68CQ4 756 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 FBXL22Q6P050 247 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 RFWD3Q6PCD5 774 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 PARS2Q7L3T8 475 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZBTB33Q86T24 672 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 CPNE8Q86YQ8 564 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 AMOTL1Q8IY63 956 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ARMC10Q8N2F6 343 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZNF397Q8NF99 534 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 OR2T3Q8NH03 318 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZNF564Q8TBZ8 553 aaPredicted RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 ADAMTS18Q8TE60 1221 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZDHHC1Q8WTX9 485 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 RTP4Q96DX8 246 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 PDXPQ96GD0 296 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZNF285Q96NJ3 590 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 MPHOSPH6Q99547 160 aaKnown RBP1.78□□□□□ -2.12
KNL1-211ENST00000533001 TRIM4Q9C037 500 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 BCL11AQ9H165 835 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 LHX3Q9UBR4 397 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 SFMBT1Q9UHJ3 866 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 VPS51Q9UID3 782 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ITGA11Q9UKX5 1188 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 ZNF835Q9Y2P0 537 aa1.78□□□□□ -2.12
KNL1-211ENST00000533001 A0A1W2PP55 124 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 SIAH2O43255 324 aa1.78□□□□□ -2.13
KNL1-211ENST00000533001 TBX6O95947 436 aaPredicted RBP1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms