RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	TNPO3	Q9Y5L0	923 aa	Known RBP	19.85	■□□□□ 0.77
FGFR1-238	ENST00000532791	TISP43	B9A030	160 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CLOCK	O15516	846 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	GUCY1B2	O75343	617 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ATP6V1G2	O95670	118 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ME2	P23368	584 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	THOP1	P52888	689 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	SLC45A4	Q5BKX6	768 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	RNF148	Q8N7C7	305 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	PIK3R5	Q8WYR1	880 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	LRRC39	Q96DD0	335 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	UROC1	Q96N76	676 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	FZD1	Q9UP38	647 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	C15orf38-AP3S2	A0A0A6YYH1	394 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	MOXD2P	A6NHM9	499 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ANKDD1B	A6NHY2	528 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	PHGDH	O43175	533 aa	Known RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CAT	P04040	527 aa	Known RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	NEK3	P51956	506 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	FKBP1A	P62942	108 aa	Known RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	IFI35	P80217	286 aa	Predicted RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	TSN	Q15631	228 aa	Known RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	INSC	Q1MX18	579 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	NEPRO	Q6NW34	567 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ARPIN	Q7Z6K5	226 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	PSTK	Q8IV42	348 aa	Known RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CLYBL	Q8N0X4	340 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	OR6Y1	Q8NGX8	325 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	FUCA2	Q9BTY2	467 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	SESN1	Q9Y6P5	492 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CABYR	O75952	493 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	FRG1	Q14331	258 aa	Known RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	PCID2	Q5JVF3	399 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	C11orf88	Q6PI97	169 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ITFG1	Q8TB96	612 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	RMND5B	Q96G75	393 aa	Predicted RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	QRFPR	Q96P65	431 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	IL22	Q9GZX6	179 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	RNF19A	Q9NV58	838 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	NRCAM	Q92823	1304 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791		A0A087X0B3	334 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ANXA6	P08133	673 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	PTPRA	P18433	802 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CCR4	P51679	360 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	STX4	Q12846	297 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ETNPPL	Q8TBG4	499 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	DCX	O43602	365 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	EPN2	O95208	641 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	FAM153B	P0C7A2	387 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CYP2C18	P33260	490 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	FAM153C	Q494X1	144 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CCDC149	Q6ZUS6	474 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	ST13P5	Q8NFI4	369 aa	Predicted RBP	19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	GRIN3A	Q8TCU5	1115 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	CXorf40A	Q8TE69	158 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	INVS	Q9Y283	1065 aa		19.84	■□□□□ 0.77
FGFR1-238	ENST00000532791	DIP2B	Q9P265	1576 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	TPP1	O14773	563 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	MYL12A	P19105	171 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	VGLL4	Q14135	290 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	SPIDR	Q14159	915 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	C15orf59	Q2T9L4	293 aa	Predicted RBP	19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	SAMD4B	Q5PRF9	694 aa	Known RBP	19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	CTSE	P14091	401 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	PIK3R1	P27986	724 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	PSMB4	P28070	264 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	NTS	P30990	170 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	RAP1GAP2	Q684P5	730 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	USP50	Q70EL3	339 aa	Predicted RBP	19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	RIOX2	Q8IUF8	465 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	COPG2	Q9UBF2	871 aa		19.83	■□□□□ 0.77
FGFR1-238	ENST00000532791	CARNS1	A5YM72	827 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	ZC3H12A	Q5D1E8	599 aa	Known RBP	19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	ARMC4	Q5T2S8	1044 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	FKBP1C	Q5VVH2	108 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	LPCAT2	Q7L5N7	544 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	ZFPM1	Q8IX07	1006 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	ZNF655	Q8N720	491 aa	Predicted RBP	19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	CDRT15	Q96T59	188 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	OMD	Q99983	421 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	KLHL25	Q9H0H3	589 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	SMIM22	K7EJ46	135 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	SLC9A3R1	O14745	358 aa	Predicted RBP	19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	PIGN	O95427	931 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	TRUB2	O95900	331 aa	Known RBP	19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	NPR3	P17342	541 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	RPL14	P50914	215 aa	Known RBP	19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	SLC34A1	Q06495	639 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	ARHGEF3	Q9NR81	526 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	ARMCX1	Q9P291	453 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	TPRKB	Q9Y3C4	175 aa		19.83	■□□□□ 0.76
FGFR1-238	ENST00000532791	ASTN2	O75129	1339 aa	Predicted RBP	19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	TRAV19	A0A0A6YYK7	116 aa		19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	SIGLEC16	A6NMB1	481 aa		19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	CENPX	A8MT69	81 aa		19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	MYL12B	O14950	172 aa		19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	CD86	P42081	329 aa		19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	ATP12A	P54707	1039 aa		19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	HECTD3	Q5T447	861 aa		19.82	■□□□□ 0.76
FGFR1-238	ENST00000532791	TRIQK	Q629K1	86 aa		19.82	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms