RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 EFTUD2Q15029 972 aaKnown RBP eCLIP15.99■□□□□ 0.151e-8■■■■■ 27.4
PPFIA1-222ENST00000532504 PLEKHA7Q6IQ23 1121 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 MON1BQ7L1V2 547 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 NLRP9Q7RTR0 991 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 SMG8Q8ND04 991 aaKnown RBP15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 MED8Q96G25 268 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 CCSER2Q9H7U1 834 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 ZBTB22O15209 634 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 SERPINB8P50452 374 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 AUHQ13825 339 aaKnown RBP15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 C2orf27AQ580R0 203 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 MFSD5Q6N075 450 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 SLC26A7Q8TE54 656 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 CASP10Q92851 521 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 GPR62Q9BZJ7 368 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 EVLQ9UI08 416 aaPredicted RBP15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 PHF24Q9UPV7 400 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 ACOT9Q9Y305 439 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 ASB3Q9Y575 518 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 KCNU1A8MYU2 1149 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 SPECC1L-ADORA2AF8WAN1 911 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 CA3P07451 260 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 OR56A5P0C7T3 313 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 SULT2A1Q06520 285 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 AHCYL2Q96HN2 611 aaKnown RBP15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 CSPG4P5Q96PW8 444 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 PPCSQ9HAB8 311 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 ZNHIT2Q9UHR6 403 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 GPSM3Q9Y4H4 160 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 ERVK-21P61565 698 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 RNF19BQ6ZMZ0 732 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 POLNQ7Z5Q5 900 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 ZNF461Q8TAF7 563 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 PAAF1Q9BRP4 392 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 KDM4CQ9H3R0 1056 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 SYTL2Q9HCH5 934 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 LRCH4O75427 683 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 DCTN3O75935 186 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 DGKGP49619 791 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 CHI3L2Q15782 390 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 ARHGAP17Q68EM7 881 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 SERAC1Q96JX3 654 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 SPASTQ9UBP0 616 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 LRIG2O94898 1065 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 HNRNPH3P31942 346 aaKnown RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 ALDH18A1P54886 795 aaKnown RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 FBXW4P57775 412 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 POU5F1Q01860 360 aaKnown RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 PKN3Q6P5Z2 889 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 ROPN1BQ9BZX4 212 aaPredicted RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 ROPN1Q9HAT0 212 aaPredicted RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 COQ4Q9Y3A0 265 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 TULP2O00295 520 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 INPP4BO15327 924 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 BBS12Q6ZW61 710 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 MAGEB10Q96LZ2 347 aaPredicted RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 FBXL18Q96ME1 805 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 CCDC3Q9BQI4 270 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 SEMA4AQ9H3S1 761 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 CHKBQ9Y259 395 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 MRPS17Q9Y2R5 130 aaKnown RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 PGAM1P18669 254 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 HALP42357 657 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 SLC26A11Q86WA9 606 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 SPATS2Q86XZ4 545 aaKnown RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 TXLNGQ9NUQ3 528 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 MIOSQ9NXC5 875 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 ADA2Q9NZK5 511 aa15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 AJAP1Q9UKB5 411 aaPredicted RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 HBS1LQ9Y450 684 aaKnown RBP15.98■□□□□ 0.15
PPFIA1-222ENST00000532504 GMNCA6NCL1 334 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 LIASO43766 372 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 HAUS5O94927 633 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 APOA4P06727 396 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 TRIP4Q15650 581 aaPredicted RBP15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 LRIG3Q6UXM1 1119 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 HDAC7Q8WUI4 952 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 SMG9Q9H0W8 520 aaKnown RBP15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 DYRK1BQ9Y463 629 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 INSL5Q9Y5Q6 135 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 PPP1R37O75864 691 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 PBX1P40424 430 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 CAP1Q01518 475 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 GAD2Q05329 585 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 SOX4Q06945 474 aaPredicted RBP15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 HGSNATQ68CP4 663 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 PLEKHO2Q8TD55 490 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 NPHS2Q9NP85 383 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 SIX4Q9UIU6 781 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 ADAM21Q9UKJ8 722 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 IGKV6D-21A0A0A0MT36 114 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 BAIAP3O94812 1187 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 STAU1O95793 577 aaKnown RBP15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 ELFN1P0C7U0 828 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 ERVK-10P10266 1014 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 HOXD13P35453 343 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 HSPA14Q0VDF9 509 aa15.97■□□□□ 0.15
PPFIA1-222ENST00000532504 TRADDQ15628 312 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms