RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 FAF2Q96CS3 445 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 RNF157Q96PX1 679 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 PRRX2Q99811 253 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 SP110Q9HB58 689 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 POLMQ9NP87 494 aaPredicted RBP12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 C11orf16Q9NQ32 467 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 HAUS2Q9NVX0 235 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 CACNA2D2Q9NY47 1150 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 SUN2Q9UH99 717 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 VPS51Q9UID3 782 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 INTS6Q9UL03 887 aaKnown RBP12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 ERVW-1Q9UQF0 538 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 OR51B4Q9Y5P0 310 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 RAD54BQ9Y620 910 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 STON1Q9Y6Q2 735 aa12.11□□□□□ -0.47
PPFIA1-220ENST00000532024 EPHX1P07099 455 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 MX2P20592 715 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 MARCKSL1P49006 195 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 SERINC3Q13530 473 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 PAFAH1B3Q15102 231 aaKnown RBP12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 RPS6KA1Q15418 735 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 PPP2R5EQ16537 467 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 ACCSLQ4AC99 568 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 ARTNQ5T4W7 220 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 SPOCD1Q6ZMY3 1216 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 CCDC33Q8N5R6 958 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 ATP11CQ8NB49 1132 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 OR52K2Q8NGK3 314 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 PCDH19Q8TAB3 1148 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 NSMCE1Q8WV22 266 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 CASKIN2Q8WXE0 1202 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 SORCS1Q8WY21 1168 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 KRT35Q92764 455 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 ALG14Q96F25 216 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 HMCESQ96FZ2 354 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 CELF6Q96J87 481 aaKnown RBP12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 GABRG3Q99928 467 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 ACE2Q9BYF1 805 aaPredicted RBP12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 LRRC19Q9H756 370 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 TRMT1Q9NXH9 659 aaKnown RBP12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 HS3ST2Q9Y278 367 aa12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
PPFIA1-220ENST00000532024 EDDM13A0A1B0GTR0 161 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 KDELR3O43731 214 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 PAPSS2O95340 614 aaPredicted RBP12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 IL4RP24394 825 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 PTPN7P35236 360 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 ACVRL1P37023 503 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 IL12RB1P42701 662 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 CDKN2BP42772 138 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 RECQLP46063 649 aaPredicted RBP12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 SERPINH1P50454 418 aaKnown RBP12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 DNA2P51530 1060 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 SEL1L2Q5TEA6 688 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 TMCO4Q5TGY1 634 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 NCBP2-AS2Q69YL0 99 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 MFSD7Q6UXD7 560 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 DSG4Q86SJ6 1040 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 C1orf210Q8IVY1 113 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 CAMKK1Q8N5S9 505 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 NPWQ8N729 165 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 TSTD1Q8NFU3 115 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 PSMB7Q99436 277 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 LRFN3Q9BTN0 628 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 NOL6Q9H6R4 1146 aaKnown RBP12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 FBXO4Q9UKT5 387 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 EFR3BQ9Y2G0 817 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
PPFIA1-220ENST00000532024 hCG_1818297A0A087WSY0 165 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 TARSL2A2RTX5 802 aaKnown RBP12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 C3orf70A6NLC5 250 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 SGK1O00141 431 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 PPP1R12AO14974 1030 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 ATP9BO43861 1147 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 MFSD11O43934 449 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 SNAP91O60641 907 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 PRAMEF11O60813 436 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 NEBLO76041 1014 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 TJP3O95049 919 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 APBB3O95704 486 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 TGM2P21980 687 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 WASP42768 502 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 CTSOP43234 321 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 NR2C2P49116 596 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 NUMBP49757 651 aa12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 STK19P49842 368 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-220ENST00000532024 PEX5P50542 639 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms