RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 I6L893 689 aaPredicted RBP17.27■□□□□ 0.36
CPSF1-207ENST00000531727 TAF4O00268 1085 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 PLK4O00444 970 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 MCF2LO15068 1137 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 PLRG1O43660 514 aaKnown RBP17.27■□□□□ 0.36
CPSF1-207ENST00000531727 RTN2O75298 545 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 LSM8O95777 96 aaKnown RBP17.27■□□□□ 0.36
CPSF1-207ENST00000531727 RHOCP08134 193 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 ZNF18P17022 549 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 KRT83P78385 493 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 SLC25A52Q3SY17 297 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 ALFQ53S48 1182 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 SLC45A4Q5BKX6 768 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 CT47A1Q5JQC4 288 aaPredicted RBP17.27■□□□□ 0.36
CPSF1-207ENST00000531727 TAF3Q5VWG9 929 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 Q6ZVU0 165 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 ERICH1Q86X53 443 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 PROSER1Q86XN7 944 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 XYLT1Q86Y38 959 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 PIP4K2CQ8TBX8 421 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 TBCBQ99426 244 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 PSMB7Q99436 277 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 GDF3Q9NR23 364 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 SAMSN1Q9NSI8 373 aaKnown RBP17.27■□□□□ 0.36
CPSF1-207ENST00000531727 HS3ST2Q9Y278 367 aa17.27■□□□□ 0.36
CPSF1-207ENST00000531727 DMXL2Q8TDJ6 3036 aa17.27■□□□□ 0.35
CPSF1-207ENST00000531727 CHD6Q8TD26 2715 aa17.27■□□□□ 0.35
CPSF1-207ENST00000531727 FREM2Q5SZK8 3169 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 YKT6O15498 198 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 SRCP12931 536 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 UCHL3P15374 230 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 EEF1GP26641 437 aaKnown RBP17.26■□□□□ 0.35
CPSF1-207ENST00000531727 NUDT1P36639 197 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 CNTN1Q12860 1018 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 SHBQ15464 509 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 TCP11X2Q5H9J9 407 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 PRAMEF14Q5SWL7 426 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 ACBD5Q5T8D3 534 aaPredicted RBP17.26■□□□□ 0.35
CPSF1-207ENST00000531727 AGBL4Q5VU57 503 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 NAPEPLDQ6IQ20 393 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 LRRC31Q6UY01 552 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 NOP9Q86U38 636 aaKnown RBP17.26■□□□□ 0.35
CPSF1-207ENST00000531727 PRPF39Q86UA1 669 aaKnown RBP17.26■□□□□ 0.35
CPSF1-207ENST00000531727 GATAD2AQ86YP4 633 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 MSANTD4Q8NCY6 345 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 C1orf74Q96LT6 269 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 C2orf49Q9BVC5 232 aaPredicted RBP17.26■□□□□ 0.35
CPSF1-207ENST00000531727 STK33Q9BYT3 514 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 ARHGAP20Q9P2F6 1191 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 FTSJ1Q9UET6 329 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 SNX10Q9Y5X0 201 aa17.26■□□□□ 0.35
CPSF1-207ENST00000531727 DRGXA6NNA5 263 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 F8VZ95 297 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 TLR4O00206 839 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 BNIP3LO60238 219 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 FLT3P36888 993 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 NXPH1P58417 271 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 POM121L1PQ3SYA9 428 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 SETD3Q86TU7 594 aaPredicted RBP17.25■□□□□ 0.35
CPSF1-207ENST00000531727 TRIM69Q86WT6 500 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 GALNT15Q8N3T1 639 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 MFSD2AQ8NA29 543 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 ATP11CQ8NB49 1132 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 EPS8L1Q8TE68 723 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 SAP25Q8TEE9 199 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 CCDC86Q9H6F5 360 aaKnown RBP17.25■□□□□ 0.35
CPSF1-207ENST00000531727 TMPRSS4Q9NRS4 437 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 VPS51Q9UID3 782 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 DMTF1Q9Y222 760 aa17.25■□□□□ 0.35
CPSF1-207ENST00000531727 FARP1Q9Y4F1 1045 aaPredicted RBP17.25■□□□□ 0.35
CPSF1-207ENST00000531727 IGLV3-10A0A075B6K4 115 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 FAM170AA1A519 330 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 E9PAM4 449 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 GOLGA8SH3BPF8 625 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 SNAP91O60641 907 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 MT-CO1P00395 513 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 ITGAVP06756 1048 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 MMEP08473 750 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 MAT2AP31153 395 aaKnown RBP17.24■□□□□ 0.35
CPSF1-207ENST00000531727 NOMO3P69849 1222 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 C2CD6Q53TS8 623 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 ARTNQ5T4W7 220 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 TRNP1Q6NT89 227 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 BNIPLQ7Z465 357 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 IQCHQ86VS3 1027 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 OXR1Q8N573 874 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 DCAF4L2Q8NA75 395 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 CPA5Q8WXQ8 436 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 CCDC114Q96M63 670 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 HAPLN3Q96S86 360 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 ERVMER34-1Q9H9K5 563 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 PREBQ9HCU5 417 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 TAB2Q9NYJ8 693 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 MPP6Q9NZW5 540 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 TMEM59LQ9UK28 342 aa17.24■□□□□ 0.35
CPSF1-207ENST00000531727 DOCK4Q8N1I0 1966 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 A0A0D9SEW6 157 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 K7ERQ8 282 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 CTSLP07711 333 aa17.23■□□□□ 0.35
CPSF1-207ENST00000531727 RRM1P23921 792 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms