RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NKX2-3Q8TAU0 364 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SEMA4DQ92854 862 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 VMP1Q96GC9 406 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 TMEM216Q9P0N5 145 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 BTBD7Q9P203 1132 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 RIC1Q4ADV7 1423 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 LIASO43766 372 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 GUCY1B2O75343 617 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 GJB6O95452 261 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ADRB2P07550 413 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 FAM153BP0C7A2 387 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 PSMB4P28070 264 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SSTR1P30872 391 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 NTSP30990 170 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ATP5C1P36542 298 aaKnown RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 FEN1P39748 380 aaKnown RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SLC34A1Q06495 639 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ST3GAL1Q11201 340 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 FAM153CQ494X1 144 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 EPHX4Q8IUS5 362 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 OR6Y1Q8NGX8 325 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SPPL2AQ8TCT8 520 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 QRFPRQ96P65 431 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SEPHS2Q99611 448 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 IGFLR1Q9H665 355 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 KCNK4Q9NYG8 393 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 C3P01024 1663 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 A0A0A0MRY4 1105 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 EPN2O95208 641 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 COX7A2P14406 83 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SQLEQ14534 574 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 CLYBLQ8N0X4 340 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 VGLL2Q8N8G2 317 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SPATA13Q96N96 652 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SAR1AQ9NR31 198 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SMPD4Q9NXE4 827 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 RAB21Q9UL25 225 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 CLPTM1O96005 669 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 HSMCR30P0CW71 290 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 PIK3R1P27986 724 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TALDO1P37837 337 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 CD86P42081 329 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 PSEN1P49768 467 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 PIK3R5Q8WYR1 880 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 MYLPFQ96A32 169 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SERHL2Q9H4I8 314 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SERHLQ9NQF3 203 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 AKAP7Q9P0M2 348 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 MAPRE3Q9UPY8 281 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ENTPD4Q9Y227 616 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 HS6ST1O60243 411 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 MAGEC1O60732 1142 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TMED10P49755 219 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SCNN1GP51170 649 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 RAB14P61106 215 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SNRPD1P62314 119 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 FRG1Q14331 258 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 WSCD1Q658N2 575 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 MAP1SQ66K74 1059 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 OR8H2Q8N162 312 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 METTL6Q8TCB7 284 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 UTP15Q8TED0 518 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ZFRQ96KR1 1074 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 C9orf16Q9BUW7 83 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 KCND1Q9NSA2 647 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SAE1Q9UBE0 346 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SNX6Q9UNH7 406 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 CRYL1Q9Y2S2 319 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ATRNO75882 1429 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 C15orf38-AP3S2A0A0A6YYH1 394 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SLC9A3R1O14745 358 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 KPNA5O15131 536 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 MSCO60682 206 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 RPA3P35244 121 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 HK2P52789 917 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 IL2P60568 153 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SKP1P63208 163 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 CNGA2Q16280 664 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 LRRC38Q5VT99 294 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 VN1R5Q7Z5H4 357 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ARPINQ7Z6K5 226 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 NKAPQ8N5F7 415 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TRPC4APQ8TEL6 797 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF558Q96NG5 402 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TINF2Q9BSI4 451 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 WDR18Q9BV38 432 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 FTHL17Q9BXU8 183 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ZYG11BQ9C0D3 744 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 MARCH2Q9P0N8 246 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ARHGAP28Q9P2N2 729 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 LIMD1Q9UGP4 676 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 PAIP2BQ9ULR5 123 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 COL1A2P08123 1366 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SLC28A1O00337 649 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TBL1XO60907 577 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 NBNO60934 754 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 PSMD7P51665 324 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SPIDRQ14159 915 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 STXBP5Q5T5C0 1151 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms