RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	FARP1	Q9Y4F1	1045 aa	Predicted RBP	16.01	■□□□□ 0.15
TM9SF1-209	ENST00000530468	HS3ST4	Q9Y661	456 aa		16.01	■□□□□ 0.15
TM9SF1-209	ENST00000530468	APC2	O95996	2303 aa		16.01	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ACACA	Q13085	2346 aa		16.01	■□□□□ 0.15
TM9SF1-209	ENST00000530468	BAHCC1	Q9P281	2608 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	GTPBP10	A4D1E9	387 aa	Known RBP	16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PRAMEF26	H0Y7S4	382 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	RNGTT	O60942	597 aa	Known RBP	16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	GRAP2	O75791	330 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CKMT2	P17540	419 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	SLC9A1	P19634	815 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	NOS2	P35228	1153 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ABCG1	P45844	678 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	KRT83	P78385	493 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PTK2	Q05397	1052 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CCDC15	Q0P6D6	951 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CNTN1	Q12860	1018 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	NME3	Q13232	169 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	HES3	Q5TGS1	186 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	FBXL19	Q6PCT2	694 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	OLFML1	Q6UWY5	402 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	FAM183BP	Q6ZVS7	135 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468		Q6ZVU0	165 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	KANSL1	Q7Z3B3	1105 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PASD1	Q8IV76	773 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ZNF397	Q8NF99	534 aa	Predicted RBP	16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	OR52K2	Q8NGK3	314 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CCDC114	Q96M63	670 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	NRSN2	Q9GZP1	204 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	HS3ST2	Q9Y278	367 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468	OR51B4	Q9Y5P0	310 aa		16	■□□□□ 0.15
TM9SF1-209	ENST00000530468		M0QYT0	321 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PAGE1	O75459	146 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	KRT9	P35527	623 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	SLC6A3	Q01959	620 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	TARDBP	Q13148	414 aa	Known RBP eCLIP	15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	NEK5	Q6P3R8	708 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ZDHHC17	Q8IUH5	632 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CACTIN-AS1	Q8N1I8	211 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	C1orf131	Q8NDD1	294 aa	Known RBP	15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	DCBLD2	Q96PD2	775 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	C2orf49	Q9BVC5	232 aa	Predicted RBP	15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	MUC3B	Q9H195	1237 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	SYNC	Q9H7C4	482 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	TMEM51	Q9NW97	253 aa		15.99	■□□□□ 0.15
TM9SF1-209	ENST00000530468	EIF4E1B	A6NMX2	242 aa	Known RBP	15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ERBB2	P04626	1255 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	SRC	P12931	536 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ACP1	P24666	158 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PON1	P27169	355 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	IRAK1	P51617	712 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	RTP5	Q14D33	572 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	POM121L1P	Q3SYA9	428 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	BRMS1L	Q5PSV4	323 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ACBD5	Q5T8D3	534 aa	Predicted RBP	15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CREBRF	Q8IUR6	639 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	TMEM145	Q8NBT3	493 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	TMIE	Q8NEW7	156 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	RFFL	Q8WZ73	363 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	KLHDC7B	Q96G42	594 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	SIK2	Q9H0K1	926 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	STAP1	Q9ULZ2	295 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PAXBP1	Q9Y5B6	917 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	AK5	Q9Y6K8	562 aa		15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	URB1	O60287	2271 aa	Known RBP	15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	GOLGA4	Q13439	2230 aa	Known RBP	15.98	■□□□□ 0.15
TM9SF1-209	ENST00000530468	LAMA5	O15230	3695 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	BNIP3L	O60238	219 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	RHOC	P08134	193 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	GGCX	P38435	758 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CLCN6	P51797	869 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CLDN6	P56747	220 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	TAS2R38	P59533	333 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	APBA1	Q02410	837 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PROX2	Q3B8N5	592 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PTPN20	Q4JDL3	420 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	HS1BP3	Q53T59	392 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PIP5KL1	Q5T9C9	394 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	LRRC69	Q6ZNQ3	347 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	C14orf80	Q86SX3	495 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	SETD3	Q86TU7	594 aa	Predicted RBP	15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	DCAF4L2	Q8NA75	395 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ATP11C	Q8NB49	1132 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PGAP3	Q96FM1	320 aa	Predicted RBP	15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	NPY6R	Q99463	290 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	TKTL2	Q9H0I9	626 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	WDCP	Q9H6R7	721 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	DYRK4	Q9NR20	520 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PIGV	Q9NUD9	493 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	ARHGEF38	Q9NXL2	777 aa		15.97	■□□□□ 0.15
TM9SF1-209	ENST00000530468	KPNA3	O00505	521 aa	Predicted RBP	15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	RRP8	O43159	456 aa	Known RBP	15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	GADD45B	O75293	160 aa	Predicted RBP	15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	F9	P00740	461 aa		15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	PRNP	P04156	253 aa		15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CTSL	P07711	333 aa		15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	AKT2	P31751	481 aa		15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CHRNA3	P32297	505 aa		15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	EIF2S3	P41091	472 aa	Known RBP	15.96	■□□□□ 0.15
TM9SF1-209	ENST00000530468	CXCR3	P49682	368 aa		15.96	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms