RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ATP13A1Q9HD20 1204 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 USP36Q9P275 1121 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 CTTNBP2NLQ9P2B4 639 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 CYP8B1Q9UNU6 501 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 HS3ST2Q9Y278 367 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 FRYLO94915 3013 aa12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 RIF1Q5UIP0 2472 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-216ENST00000529856 SDK1Q7Z5N4 2213 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 WDR87Q6ZQQ6 2873 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 CXorf51AA0A1B0GTR3 108 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 FGF10O15520 208 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 EPN2O95208 641 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 IGLV3-19P01714 112 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 ACADMP11310 421 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 SRCP12931 536 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 TCF4P15884 667 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 GLDCP23378 1020 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 ACVRL1P37023 503 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 TPMTP51580 245 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 ZNF135P52742 658 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 TPI1P60174 286 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 ZBTB16Q05516 673 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 SLC20A2Q08357 652 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 POLD3Q15054 466 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 ACCSLQ4AC99 568 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 SPDYCQ5MJ68 293 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 ZNF776Q68DI1 518 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 IL31Q6EBC2 164 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 RETSATQ6NUM9 610 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 LPCAT2Q7L5N7 544 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 HINFPQ9BQA5 517 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 NOL6Q9H6R4 1146 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 CD93Q9NPY3 652 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 INTUQ9ULD6 942 aa12.97□□□□□ -0.33
CCDC90B-216ENST00000529856 FAM186AA6NE01 2351 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 K7ERQ8 282 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 CBX4O00257 560 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 EEF2KO00418 725 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 RAMP2O60895 175 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 RNASEH1O60930 286 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 LRP3O75074 770 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 PROSCO94903 275 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 LCA5LO95447 670 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 RARAP10276 462 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 VAV1P15498 845 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 TGM1P22735 817 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 FECHP22830 423 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 CD6P30203 668 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 CDC25BP30305 580 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 OXTRP30559 389 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 HCAR3P49019 387 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 CLCN6P51797 869 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 YBEYP58557 167 aaPredicted RBP12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 ARF5P84085 180 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 KCNT1Q5JUK3 1230 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 LINGO4Q6UY18 593 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 CACUL1Q86Y37 369 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 TMEFF1Q8IYR6 380 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 UMODL1-AS1Q8N2C9 162 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 STK40Q8N2I9 435 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 ATP11CQ8NB49 1132 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 SLC35G2Q8TBE7 412 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 TEKT4Q8WW24 435 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 ZWILCHQ9H900 591 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 DONSONQ9NYP3 566 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 LCMT1Q9UIC8 334 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 PCDHGA5Q9Y5G8 931 aa12.96□□□□□ -0.33
CCDC90B-216ENST00000529856 CEP192Q8TEP8 1941 aa12.96□□□□□ -0.34
CCDC90B-216ENST00000529856 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 SMAD6O43541 496 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 KDELR3O43731 214 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 NDUFS2O75306 463 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 MTA2O94776 668 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 CD160O95971 181 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 DNTTP04053 509 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 GOT1P17174 413 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 MAGEA1P43355 309 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 SERPINH1P50454 418 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 RPL6Q02878 288 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 SLC25A11Q02978 314 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 SPEM2Q0P670 501 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 ELAVL3Q14576 367 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 TCEAL1Q15170 157 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 CST6Q15828 149 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 DPYSL2Q16555 572 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 SMTNL2Q2TAL5 461 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 PPP6R3Q5H9R7 873 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 TXNRD3NBQ6F5E7 133 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 RFX8Q6ZV50 586 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 Q6ZVU0 165 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 TMTC1Q8IUR5 882 aa12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 MMAAQ8IVH4 418 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-216ENST00000529856 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms