RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CCDC138Q96M89 665 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 ZNF560Q96MR9 790 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 WDCPQ9H6R7 721 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 PRDM5Q9NQX1 630 aaPredicted RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 PLK2Q9NYY3 685 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 SPAG6O75602 509 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 TRIM16LQ309B1 348 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 ANGPTL8Q6UXH0 198 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 EFHD1Q9BUP0 239 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 SUPT7LO94864 414 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 MMP8P22894 467 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 TGFB2P61812 414 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 CDKL1Q00532 357 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 C16orf89Q6UX73 402 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 FAM183BPQ6ZVS7 135 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 NDEL1Q9GZM8 345 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 BRD8Q9H0E9 1235 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 ZNF696Q9H7X3 374 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 AKAP10O43572 662 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 CDK9P50750 372 aaKnown RBP18.2■□□□□ 0.5
LTBP3-210ENST00000528516 GBE1Q04446 702 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 ITGADQ13349 1161 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 SGO1Q5FBB7 561 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 TAS2R42Q7RTR8 314 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 ATPAF2Q8N5M1 289 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 SAMD3Q8N6K7 520 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 FAM156AQ8NDB6 213 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 ZNF512Q96ME7 567 aaPredicted RBP18.2■□□□□ 0.5
LTBP3-210ENST00000528516 PGLYRP2Q96PD5 576 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 PKP2Q99959 881 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 SNRNP25Q9BV90 132 aaKnown RBP18.2■□□□□ 0.5
LTBP3-210ENST00000528516 GID8Q9NWU2 228 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 CPA4Q9UI42 421 aa18.2■□□□□ 0.5
LTBP3-210ENST00000528516 RUVBL2Q9Y230 463 aaKnown RBP18.2■□□□□ 0.5
LTBP3-210ENST00000528516 LY75O60449 1722 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 TMEM191CA6NGB0 347 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 J3QRK9 145 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 RNF103O00237 685 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 TKTL1P51854 596 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 TSPY1Q01534 308 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 DMPKQ09013 629 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 ITGA7Q13683 1181 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 TTC33Q6PID6 262 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 KYQ8NBH2 561 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 GPRC5AQ8NFJ5 357 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 RIN3Q8TB24 985 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 FBXL8Q96CD0 374 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 OMDQ99983 421 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 DRC3Q9H069 523 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 ABT1Q9ULW3 272 aaKnown RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 MYO18AQ92614 2054 aaKnown RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 COL6A2P12110 1019 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 XRCC1P18887 633 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 KBTBD6Q86V97 674 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 ADCY4Q8NFM4 1077 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 APBA2Q99767 749 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 CNTN3Q9P232 1028 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 CACNG4Q9UBN1 327 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 FARP1Q9Y4F1 1045 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 UBR3Q6ZT12 1888 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 PSMD12O00232 456 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 LRCH4O75427 683 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 ASS1P00966 412 aaKnown RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 CPA3P15088 417 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 CDKN2BP42772 138 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 BEX3Q00994 111 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 GSTM4Q03013 218 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 NCLNQ969V3 563 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 LENG8Q96PV6 779 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 FAM96AQ9H5X1 160 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-210ENST00000528516 SLC17A6Q9P2U8 582 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 CNTNAP2Q9UHC6 1331 aa18.19■□□□□ 0.5
LTBP3-210ENST00000528516 C1orf232A0A0U1RR37 186 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 TNPO2O14787 897 aaKnown RBP18.18■□□□□ 0.5
LTBP3-210ENST00000528516 APOEP02649 317 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 HADHAP40939 763 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 IDH3AP50213 366 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 THOP1P52888 689 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 CSHL1Q14406 222 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 GPR107Q5VW38 600 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 EGFLAMQ63HQ2 1017 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 DRICH1Q6PGQ1 229 aaPredicted RBP18.18■□□□□ 0.5
LTBP3-210ENST00000528516 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 OR52K1Q8NGK4 314 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 MFSD14AQ96MC6 490 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 SIRPGQ9P1W8 387 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 APOC4-APOC2K7ER74 178 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 APOC2P02655 101 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 GOT1P17174 413 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 TAF6P49848 677 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 RPL26P61254 145 aaKnown RBP18.18■□□□□ 0.5
LTBP3-210ENST00000528516 MRPS5P82675 430 aaKnown RBP18.18■□□□□ 0.5
LTBP3-210ENST00000528516 ZBTB17Q13105 803 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 BORCS5Q969J3 196 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 DHRS4Q9BTZ2 278 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 EBF1Q9UH73 591 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 VAPBO95292 243 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 ATP5BP06576 529 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms