RNA–Protein interactions for RNA: ENST00000528455.5

CD44-228, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-228ENST00000528455 ACSL4O60488 711 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 PAGE1O75459 146 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 APOEP02649 317 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 CKMP06732 381 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 PYGMP11217 842 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 TCF4P15884 667 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 GJA1P17302 382 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 EPHA1P21709 976 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 IL4RP24394 825 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 COL8A1P27658 744 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 PTPN7P35236 360 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 CHKAP35790 457 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 ATXN1P54253 815 aaKnown RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 NTHL1P78549 312 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 CYP4F8P98187 520 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 AMPD2Q01433 879 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 PPP2R5EQ16537 467 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 SLC5A9Q2M3M2 681 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 C5orf22Q49AR2 442 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 KCNT1Q5JUK3 1230 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 DNTTIP2Q5QJE6 756 aaKnown RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 ADGRF1Q5T601 910 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 TXNRD3NBQ6F5E7 133 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 NXPE4Q6UWF7 544 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 VN1R5Q7Z5H4 357 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 FAM131BQ86XD5 332 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 CPNE8Q86YQ8 564 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 MIB1Q86YT6 1006 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 CREG2Q8IUH2 290 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 ARID3BQ8IVW6 561 aaPredicted RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 RASGEF1CQ8N431 466 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 CCDC185Q8N715 623 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 ITFG1Q8TB96 612 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 ACTRT1Q8TDG2 376 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 MAIP1Q8WWC4 291 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 RAPGEF5Q92565 580 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 ALG3Q92685 438 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 KRT35Q92764 455 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 EDAQ92838 391 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 FGF13Q92913 245 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 OTUB2Q96DC9 234 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 RNF157Q96PX1 679 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 SLC22A12Q96S37 553 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 PEBP4Q96S96 227 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 NAP1L3Q99457 506 aaPredicted RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 SNRNP25Q9BV90 132 aaKnown RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 MAK16Q9BXY0 300 aaKnown RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 MUC3BQ9H195 1237 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 DHX35Q9H5Z1 703 aaKnown RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 ZWILCHQ9H900 591 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 TRPC7Q9HCX4 862 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 OBP2AQ9NY56 170 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 TBC1D14Q9P2M4 693 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 PPARGC1AQ9UBK2 798 aaKnown RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 CDC23Q9UJX2 597 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 PACSIN2Q9UNF0 486 aaPredicted RBP7.63□□□□□ -1.19
CD44-228ENST00000528455 AP4E1Q9UPM8 1137 aa7.63□□□□□ -1.19
CD44-228ENST00000528455 DOCK4Q8N1I0 1966 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 IGLV3-10A0A075B6K4 115 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 SYNJ2BP-COX16A0A087WUM0 186 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 C3orf70A6NLC5 250 aaPredicted RBP7.62□□□□□ -1.19
CD44-228ENST00000528455 I6L893 689 aaPredicted RBP7.62□□□□□ -1.19
CD44-228ENST00000528455 LEFTY2O00292 366 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 SLC9A3R1O14745 358 aaPredicted RBP7.62□□□□□ -1.19
CD44-228ENST00000528455 FANCGO15287 622 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 GREM1O60565 184 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 URI1O94763 535 aaPredicted RBP7.62□□□□□ -1.19
CD44-228ENST00000528455 TJP3O95049 919 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 KLKB1P03952 638 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 LAMP2P13473 410 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ZFXP17010 805 aaPredicted RBP7.62□□□□□ -1.19
CD44-228ENST00000528455 CXCR5P32302 372 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ARL4AP40617 200 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 CDKN2BP42772 138 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 PAFAH1B1P43034 410 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 NR2C2P49116 596 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 CDH6P55285 790 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ZXDBP98169 803 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 SEMA3BQ13214 749 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ANKRD20A8PQ5CZ79 823 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ZFYVE27Q5T4F4 411 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 DAB2IPQ5VWQ8 1189 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 MFSD7Q6UXD7 560 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 LRRC31Q6UY01 552 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 SPOCD1Q6ZMY3 1216 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 DENND1CQ8IV53 801 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 FAM217AQ8IXS0 508 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ADGRG2Q8IZP9 1017 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 CPXM2Q8N436 756 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 LZTR1Q8N653 840 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 HSPH1Q92598 858 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 USP13Q92995 863 aaPredicted RBP7.62□□□□□ -1.19
CD44-228ENST00000528455 ZSWIM3Q96MP5 696 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ZNF670Q9BS34 389 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 SIK2Q9H0K1 926 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 KIF9Q9HAQ2 790 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 PCDH18Q9HCL0 1135 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 ANLNQ9NQW6 1124 aa7.62□□□□□ -1.19
CD44-228ENST00000528455 HOMER3Q9NSC5 361 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms