RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 CBX8Q9HC52 389 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 AASDHPPTQ9NRN7 309 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 MYO1AQ9UBC5 1043 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 DNAI1Q9UI46 699 aa9.32□□□□□ -0.92
CMTM1-210ENST00000528441 PI4KAP42356 2102 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 GON4LQ3T8J9 2241 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 METTL12A8MUP2 240 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 KPNA3O00505 521 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 DAPK3O43293 454 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 SNAP91O60641 907 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 CER1O95813 267 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 TPM1P09493 284 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 UNGP13051 313 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 VAV1P15498 845 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 SSR1P43307 286 aaKnown RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 FANCCQ00597 558 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 ZNF252P-AS1Q0IIN9 211 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 CCDC15Q0P6D6 951 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 FOXC1Q12948 553 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 SKOR2Q2VWA4 1001 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 SLC45A4Q5BKX6 768 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 OTUD1Q5VV17 481 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 ACAD10Q6JQN1 1059 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 CXorf57Q6NSI4 855 aaKnown RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 RETSATQ6NUM9 610 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 LINGO4Q6UY18 593 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 STRADAQ7RTN6 431 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 SLFN11Q7Z7L1 901 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 SETD3Q86TU7 594 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 KDM1BQ8NB78 822 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 C3orf20Q8ND61 904 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 CADM4Q8NFZ8 388 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 OR7D4Q8NG98 312 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 OR2I1PQ8NGU4 316 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 GRIN3AQ8TCU5 1115 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 SETD7Q8WTS6 366 aaKnown RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 ZNF653Q96CK0 615 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 PGAP3Q96FM1 320 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 ZNF419Q96HQ0 510 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 MRGPRX3Q96LB0 322 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 HAPLN3Q96S86 360 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 PCDHB18PQ96TA0 734 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 FEM1AQ9BSK4 669 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 RSPH9Q9H1X1 276 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 TMEM59LQ9UK28 342 aa9.31□□□□□ -0.92
CMTM1-210ENST00000528441 MUC22E2RYF6 1773 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 TNRC6BQ9UPQ9 1833 aaKnown RBP9.31□□□□□ -0.92
CMTM1-210ENST00000528441 NYNRINQ9P2P1 1898 aaKnown RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 CCP110O43303 1012 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 RAMP2O60895 175 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 RNF8O76064 485 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 KCNK5O95279 499 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 SKILP12757 684 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 C5AR1P21730 350 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 RRM1P23921 792 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 MAT2AP31153 395 aaKnown RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 RFC1P35251 1148 aaPredicted RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 ETFBP38117 255 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 AFF3P51826 1226 aaKnown RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 GRIK2Q13002 908 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 TSR1Q2NL82 804 aaKnown RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 CCDC14Q49A88 953 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 ZFYVE27Q5T4F4 411 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 C9orf64Q5T6V5 341 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 KIAA0895LQ68EN5 471 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 NCEH1Q6PIU2 408 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 WDR59Q6PJI9 974 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 IL27RAQ6UWB1 636 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 USP30Q70CQ3 517 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 PRPF39Q86UA1 669 aaKnown RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 PHF13Q86YI8 300 aaPredicted RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 DCAF4L2Q8NA75 395 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 PIP4K2CQ8TBX8 421 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 TRIM11Q96F44 468 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 PPP1R16AQ96I34 528 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 NEUROG2Q9H2A3 272 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 TNKS2Q9H2K2 1166 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 HAUS4Q9H6D7 363 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 CATSPERBQ9H7T0 1116 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 CD248Q9HCU0 757 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 PARVAQ9NVD7 372 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 CNOT8Q9UFF9 292 aaKnown RBP9.3□□□□□ -0.92
CMTM1-210ENST00000528441 OR12D3Q9UGF7 316 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 VPS51Q9UID3 782 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 MYO6Q9UM54 1294 aa9.3□□□□□ -0.92
CMTM1-210ENST00000528441 CFAP54Q96N23 3096 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 A0A0D9SEW6 157 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 A0A1B0GTH6 734 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 A0A1B0GVT2 93 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 A0A1W2PQC6 194 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 LRRC10BA6NIK2 292 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 C2CD4BA6NLJ0 364 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 SIGLEC16A6NMB1 481 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 GOLGA8CPA6NN73 597 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PLK4O00444 970 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 NEMP1O14524 444 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 CBFA2T2O43439 604 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PCDH8O95206 1070 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PRNPP04156 253 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms