RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C2CD4BA6NLJ0 364 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 E9PAM4 449 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 C1QTNF3-AMACRE9PGA6 284 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 MCF2LO15068 1137 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 EPHB6O15197 1021 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 RNASEH2AO75792 299 aaKnown RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 CER1O95813 267 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 SERPINC1P01008 464 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 IL1BP01584 269 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 ZNF883P0CG24 379 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 MAOBP27338 520 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 RECQLP46063 649 aaPredicted RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 NOVA1P51513 510 aaKnown RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 CCR5P51681 352 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 GALCP54803 685 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 GEMIN4P57678 1058 aaKnown RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 ATP11AP98196 1134 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 DLG2Q15700 870 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 KLHL40Q2TBA0 621 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 SKOR2Q2VWA4 1001 aaPredicted RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 CCDC14Q49A88 953 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 SH3PXD2AQ5TCZ1 1133 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 KIAA0895LQ68EN5 471 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 PSAPL1Q6NUJ1 521 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 IRF2BP2Q7Z5L9 587 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 C14orf80Q86SX3 495 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 MMAAQ8IVH4 418 aaKnown RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 ZNF683Q8IZ20 524 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 STK40Q8N2I9 435 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 SH2D3CQ8N5H7 860 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 MINDY1Q8N5J2 469 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 ATP11CQ8NB49 1132 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 CENPIQ92674 756 aaPredicted RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 IQCDQ96DY2 449 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 NCAPGQ9BPX3 1015 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 C11orf70Q9BRQ4 267 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 NEUROG2Q9H2A3 272 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 HSD3B7Q9H2F3 369 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 METTL5Q9NRN9 209 aaKnown RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 EIF2B4Q9UI10 523 aaKnown RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 HPCAL4Q9UM19 191 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 HS3ST2Q9Y278 367 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.85□□□□□ -0.83
CHD7-208ENST00000528280 PCDHB9Q9Y5E1 797 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 NAV2Q8IVL1 2488 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 PI4KAP42356 2102 aa9.85□□□□□ -0.83
CHD7-208ENST00000528280 GON4LQ3T8J9 2241 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 ATXN2Q99700 1313 aaKnown RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 GOLGA6L19H0YKK7 550 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 MID1O15344 667 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 MAGEC1O60732 1142 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 CNTN5O94779 1100 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 FSBPO95073 299 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 TRIM16O95361 564 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 GZMAP12544 262 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 ATP1A3P13637 1013 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 TFE3P19532 575 aaPredicted RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 GPD1P21695 349 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 RFC1P35251 1148 aaPredicted RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 GRIA4P48058 902 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 MAPKAPK2P49137 400 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 ZNF143P52747 638 aaPredicted RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 RACK1P63244 317 aaKnown RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 PTP4A2Q12974 167 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 C2CD6Q53TS8 623 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 SLC45A4Q5BKX6 768 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 SFMBT2Q5VUG0 894 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 OTUD1Q5VV17 481 aaPredicted RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 DCUN1D2Q6PH85 259 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 SLFN11Q7Z7L1 901 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 PRPF39Q86UA1 669 aaKnown RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 CIR1Q86X95 450 aaPredicted RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 FAM131BQ86XD5 332 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 ZCCHC9Q8N567 271 aaKnown RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 DCAF4L2Q8NA75 395 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 TMIEQ8NEW7 156 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 C1orf216Q8TAB5 229 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 FRS2Q8WU20 508 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 SNX19Q92543 992 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 NTAN1Q96AB6 310 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 BIRC7Q96CA5 298 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 PCDHB18PQ96TA0 734 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 CEP44Q9C0F1 390 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 C6orf106Q9H6K1 298 aaPredicted RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 CD93Q9NPY3 652 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 PARVAQ9NVD7 372 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 AIPL1Q9NZN9 384 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 PPM1HQ9ULR3 514 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 WASF3Q9UPY6 502 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 PCDHGB2Q9Y5G2 931 aa9.84□□□□□ -0.83
CHD7-208ENST00000528280 BZW2Q9Y6E2 419 aaKnown RBP9.84□□□□□ -0.83
CHD7-208ENST00000528280 TBC1D3DA0A087WVF3 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3IA0A087WXS9 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3EA0A087X179 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3KA0A087X1G2 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 A0A1B0GTH6 734 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 A0A1W2PP55 124 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 A0A1W2PPC4 97 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3FA6NER0 549 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms