RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ARHGEF4Q9NR80 690 aa15.33■□□□□ 0.05
USP47-207ENST00000527733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.33■□□□□ 0.05
USP47-207ENST00000527733 A0A096LPK6 155 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 GOLGA8TH3BQL2 631 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 ANGPT2O15123 496 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 ACADMP11310 421 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 CRABP2P29373 138 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 TCF25Q9BQ70 676 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 STRA6Q9BX79 667 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 AGO3Q9H9G7 860 aaKnown RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 SLC13A4Q9UKG4 626 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 TRPC5OSA6NMA1 111 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 PIRO00625 290 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 ENO1P06733 434 aaKnown RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 MYBL2P10244 700 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 CES1P23141 567 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 SERPINB4P48594 390 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 MAXP61244 160 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 CRADDP78560 199 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 IFI35P80217 286 aaPredicted RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 ANKRD20A4Q4UJ75 823 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 TEX44Q53QW1 395 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 ZNF697Q5TEC3 545 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 TRPM8Q7Z2W7 1104 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 SCAMP5Q8TAC9 235 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 FAM161BQ96MY7 647 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 HAUS8Q9BT25 410 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 C11orf84Q9BUA3 381 aaPredicted RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 ATP13A3Q9H7F0 1226 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 VRTNQ9H8Y1 702 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 NCKIPSDQ9NZQ3 722 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 ADGRA2Q96PE1 1338 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 N4BP2Q86UW6 1770 aaPredicted RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 SLC38A8A6NNN8 435 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 E9PAM4 449 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 SPTLC1O15269 473 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 TACR2P21452 398 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 PARP15Q460N3 678 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 NIPA2Q8N8Q9 360 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 CLEC4CQ8WTT0 213 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 ZMAT2Q96NC0 199 aaKnown RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 EBNA1BP2Q99848 306 aaKnown RBP15.33■□□□□ 0.04
USP47-207ENST00000527733 ZDHHC6Q9H6R6 413 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 VCX3AQ9NNX9 186 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 TBC1D14Q9P2M4 693 aa15.33■□□□□ 0.04
USP47-207ENST00000527733 MFSD11O43934 449 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 ACSL4O60488 711 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CLASP2O75122 1294 aaKnown RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 ABHD2P08910 425 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CALRP27797 417 aaKnown RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 OVGP1Q12889 678 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 TRIP4Q15650 581 aaPredicted RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 TRIM68Q6AZZ1 485 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 AGO1Q9UL18 857 aaKnown RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 KCNU1A8MYU2 1149 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CHUKO15111 745 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CCL16O15467 120 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 TBC1D4O60343 1298 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 SASH3O75995 380 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 C8AP07357 584 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CFHP08603 1231 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CD48P09326 243 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 ERVK-10P10266 1014 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 AARSP49588 968 aaKnown RBP eCLIP15.32■□□□□ 0.04
USP47-207ENST00000527733 KREMEN2Q8NCW0 462 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 USP6NLQ92738 828 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CERS2Q96G23 380 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 FAR2Q96K12 515 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 B3GALT6Q96L58 329 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 XYLT2Q9H1B5 865 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 KDM4CQ9H3R0 1056 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 GLOD4Q9HC38 313 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 CYP4F12Q9HCS2 524 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 BCLAF3A2AJT9 711 aaKnown RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 LMNAP02545 664 aaKnown RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 TPBGLP0DKB5 382 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 VCLP18206 1134 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 RABGGTBP53611 331 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 FBXL19Q6PCT2 694 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 ZCCHC2Q9C0B9 1178 aaKnown RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 VPS45Q9NRW7 570 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 FLRT1Q9NZU1 646 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 KIAA1522Q9P206 1035 aaPredicted RBP15.32■□□□□ 0.04
USP47-207ENST00000527733 FBXW11Q9UKB1 542 aa15.32■□□□□ 0.04
USP47-207ENST00000527733 MAP2K7O14733 419 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 ALOX15BO15296 676 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 EDIL3O43854 480 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 ADRA1DP25100 572 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 WNT3AP56704 352 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 CDK18Q07002 472 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
USP47-207ENST00000527733 TCP10LQ8TDR4 215 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 APOPT1Q96IL0 206 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 EXOC2Q96KP1 924 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 SPATA16Q9BXB7 569 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 SDCBP2Q9H190 292 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 SERPIND1P05546 499 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms