RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 PRPSAP1Q14558 356 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 ASRGL1Q7L266 308 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 TMCO2Q7Z6W1 182 aaPredicted RBP17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 RASSF3Q86WH2 238 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 DIS3LQ8TF46 1054 aaKnown RBP17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 ZNF75CPQ92670 426 aaPredicted RBP17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 ZNF669Q96BR6 464 aaPredicted RBP17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 SPATA17Q96L03 361 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 VN1R3Q9BXE9 311 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 SLC13A1Q9BZW2 595 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 ARHGEF3Q9NR81 526 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 USH1CQ9Y6N9 552 aa17.64■□□□□ 0.41
PCDHA6-202ENST00000527624 HGSO14964 777 aaPredicted RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 CNTN5O94779 1100 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 MT-CYBP00156 380 aaPredicted RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 SKIV2L2P42285 1042 aaKnown RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 ZNF33AQ06730 810 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 RAP1GAP2Q684P5 730 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 CYS1Q717R9 158 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 CDKL2Q92772 493 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 IQCGQ9H095 443 aaKnown RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 NOL6Q9H6R4 1146 aaKnown RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 LRRC40Q9H9A6 602 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 PCMTD2Q9NV79 361 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 ATP11BQ9Y2G3 1177 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 MATN3O15232 486 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 F7P08709 466 aaPredicted RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 OR1D2P34982 312 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 NRG1Q02297 640 aaPredicted RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 ALFQ53S48 1182 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 AFMIDQ63HM1 303 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 FAM117BQ6P1L5 589 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 MARK2Q7KZI7 788 aaKnown RBP17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 ZNF683Q8IZ20 524 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 ZNF276Q8N554 614 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 NOD2Q9HC29 1040 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 BAIAP2L1Q9UHR4 511 aa17.63■□□□□ 0.41
PCDHA6-202ENST00000527624 SLC38A8A6NNN8 435 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 ALADP13716 330 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 ETV4P43268 484 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 SERPINB9P50453 376 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 RPL10AP62906 217 aaKnown RBP17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 PACS1Q6VY07 963 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 ATP6V0D2Q8N8Y2 350 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 PTPRN2Q92932 1015 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 MTBPQ96DY7 904 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 CERS2Q96G23 380 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 BTN2A3PQ96KV6 586 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 IL12RB2Q99665 862 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 BEGAINQ9BUH8 593 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 ZYG11BQ9C0D3 744 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 OLA1Q9NTK5 396 aaKnown RBP17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 RBM22Q9NW64 420 aaKnown RBP eCLIP17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 ZFATQ9P243 1243 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 IPO11Q9UI26 975 aaKnown RBP17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 CCDC78A2IDD5 438 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 TLR5O60602 858 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 UNC5CO95185 931 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 TOP3BO95985 862 aaKnown RBP17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 HLA-DQB2P05538 268 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 PSEN1P49768 467 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 SMARCB1Q12824 385 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 IKBKEQ14164 716 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 SETDB1Q15047 1291 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 USP41Q3LFD5 358 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 SPANXN3Q5MJ09 141 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 KIAA1841Q6NSI8 718 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 FBXL22Q6P050 247 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 CIR1Q86X95 450 aaPredicted RBP17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 NDUFAF2Q8N183 169 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 IPMKQ8NFU5 416 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 IGSF8Q969P0 613 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 MFSD3Q96ES6 412 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 CWH43Q9H720 699 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 GLOD4Q9HC38 313 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 PRDM5Q9NQX1 630 aaPredicted RBP17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 CHRAC1Q9NRG0 131 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 CHKBQ9Y259 395 aa17.62■□□□□ 0.41
PCDHA6-202ENST00000527624 TANC1Q9C0D5 1861 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 SLC8A1P32418 973 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 NUMBP49757 651 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 SPOUT1Q5T280 376 aaKnown RBP17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 NAPEPLDQ6IQ20 393 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 OTOAQ7RTW8 1153 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 KIF2BQ8N4N8 673 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 HMCESQ96FZ2 354 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 LRRC37BQ96QE4 947 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 MYLK2Q9H1R3 596 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 VPS11Q9H270 941 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 MTRRQ9UBK8 725 aa17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 FNDC1Q4ZHG4 1894 aaPredicted RBP17.61■□□□□ 0.41
PCDHA6-202ENST00000527624 NEBLO76041 1014 aa17.6■□□□□ 0.41
PCDHA6-202ENST00000527624 KRT16P08779 473 aa17.6■□□□□ 0.41
PCDHA6-202ENST00000527624 DHRS4L1P0CG22 281 aa17.6■□□□□ 0.41
PCDHA6-202ENST00000527624 RHOQP17081 205 aa17.6■□□□□ 0.41
PCDHA6-202ENST00000527624 CCNFP41002 786 aa17.6■□□□□ 0.41
PCDHA6-202ENST00000527624 ANKRD20A4Q4UJ75 823 aa17.6■□□□□ 0.41
PCDHA6-202ENST00000527624 SLC8B1Q6J4K2 584 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms