RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CSRP3P50461 194 aa17.92■□□□□ 0.46
USH1C-205ENST00000527020 ABCE1P61221 599 aaKnown RBP17.92■□□□□ 0.46
USH1C-205ENST00000527020 DSC3Q14574 896 aa17.92■□□□□ 0.46
USH1C-205ENST00000527020 TAF11Q15544 211 aa17.92■□□□□ 0.46
USH1C-205ENST00000527020 IFNL1Q8IU54 200 aa17.92■□□□□ 0.46
USH1C-205ENST00000527020 MAGEB16A2A368 324 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 SPECC1L-ADORA2AF8WAN1 911 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 G3V2L1 256 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 ITGB1P05556 798 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 SRGAP2BP0DMP2 458 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 IDH3AP50213 366 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 MPP3Q13368 585 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 RCN1Q15293 331 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 NAPRTQ6XQN6 538 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 KIRREL3Q8IZU9 778 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 CFAP61Q8NHU2 1237 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 URGCPQ8TCY9 931 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 USP33Q8TEY7 942 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 OXCT2Q9BYC2 517 aaPredicted RBP17.91■□□□□ 0.46
USH1C-205ENST00000527020 UPF3AQ9H1J1 476 aaKnown RBP17.91■□□□□ 0.46
USH1C-205ENST00000527020 IARS2Q9NSE4 1012 aaKnown RBP17.91■□□□□ 0.46
USH1C-205ENST00000527020 C20orf96Q9NUD7 363 aaPredicted RBP17.91■□□□□ 0.46
USH1C-205ENST00000527020 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.91■□□□□ 0.46
USH1C-205ENST00000527020 A0A096LPK6 155 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 F8W810 466 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 PSMG1O95456 288 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 GCKP35557 465 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 CSE1LP55060 971 aaKnown RBP17.91■□□□□ 0.46
USH1C-205ENST00000527020 METTL23Q86XA0 190 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 SPATA22Q8NHS9 363 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 NRG4Q8WWG1 115 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 RNF34Q969K3 372 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 DNAJC28Q9NX36 388 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 SORCS3Q9UPU3 1222 aa17.91■□□□□ 0.46
USH1C-205ENST00000527020 GOLGA8TH3BQL2 631 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 IRAK2O43187 625 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 MPOP05164 745 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 C2P06681 752 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 CPOXP36551 454 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 THPOP40225 353 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 CDK7P50613 346 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 ZNF33AQ06730 810 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 CDH17Q12864 832 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 MANEALQ5VSG8 457 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 RWDD4Q6NW29 188 aaKnown RBP17.9■□□□□ 0.46
USH1C-205ENST00000527020 BEND5Q7L4P6 421 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.9■□□□□ 0.46
USH1C-205ENST00000527020 RSPH1Q8WYR4 309 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 NAF1Q96HR8 494 aaKnown RBP17.9■□□□□ 0.46
USH1C-205ENST00000527020 VPS39Q96JC1 886 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 CLPTM1LQ96KA5 538 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 LBHD1Q9BQE6 289 aaPredicted RBP17.9■□□□□ 0.46
USH1C-205ENST00000527020 KIFC1Q9BW19 673 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 SIK2Q9H0K1 926 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 A0A0U1RQF3 1178 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 TM7SF2O76062 418 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 ABL2P42684 1182 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 VWA5B1Q5TIE3 1220 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 NAPEPLDQ6IQ20 393 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 ARHGAP24Q8N264 748 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 PPP4R1Q8TF05 950 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 TRIB2Q92519 343 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 FAM161BQ96MY7 647 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 C1orf21Q9H246 121 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 PCDHB12Q9Y5F1 795 aa17.9■□□□□ 0.46
USH1C-205ENST00000527020 CCDC78A2IDD5 438 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 DFFAO00273 331 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 TIMM44O43615 452 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 SIN3BO75182 1162 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 TBX10O75333 385 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 CCNCP24863 283 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 CDC25CP30307 473 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 HOXC13P31276 330 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 CYP2C18P33260 490 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 COG7P83436 770 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 TUSC3Q13454 348 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 THOC5Q13769 683 aaKnown RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 SCUBE1Q8IWY4 988 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 NDFIP2Q9NV92 336 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 GEMIN8Q9NWZ8 242 aaKnown RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 APOBEC2Q9Y235 224 aaKnown RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 MEI4A8MW99 385 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 TNFRSF10BO14763 440 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 MSI1O43347 362 aaKnown RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 PAGE1O75459 146 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 MT-CYBP00156 380 aaPredicted RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 RAB27AP51159 221 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 PGGT1BP53609 377 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 GRIK3Q13003 919 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 PRPSAP1Q14558 356 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 LPIN1Q14693 890 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 GRM3Q14832 879 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 CMPK2Q5EBM0 449 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 OVOS1Q6IE37 1185 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 DENND5AQ6IQ26 1287 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 ZC3HC1Q86WB0 502 aaKnown RBP17.89■□□□□ 0.45
USH1C-205ENST00000527020 ULK2Q8IYT8 1036 aa17.89■□□□□ 0.45
USH1C-205ENST00000527020 TMEM151AQ8N4L1 468 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms