RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 R3HDM2Q9Y2K5 976 aaKnown RBP14.03□□□□□ -0.16
CD44-224ENST00000526669 MTF2Q9Y483 593 aaPredicted RBP14.03□□□□□ -0.16
CD44-224ENST00000526669 DOCK9Q9BZ29 2069 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 CEP192Q8TEP8 1941 aa14.02□□□□□ -0.16
CD44-224ENST00000526669 ESPNB1AK53 854 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 J3KR12 359 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 K7EQS6 105 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 APOC4-APOC2K7ER74 178 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 APOC2P02655 101 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 TCP1P17987 556 aaKnown RBP14.02□□□□□ -0.17
CD44-224ENST00000526669 TIE1P35590 1138 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 WASP42768 502 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 YBEYP58557 167 aaPredicted RBP14.02□□□□□ -0.17
CD44-224ENST00000526669 ARF5P84085 180 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 SIGLEC14Q08ET2 396 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 GALNT2Q10471 571 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 KLF1Q13351 362 aaPredicted RBP14.02□□□□□ -0.17
CD44-224ENST00000526669 SERINC3Q13530 473 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 ZC3H18Q86VM9 953 aaKnown RBP14.02□□□□□ -0.17
CD44-224ENST00000526669 ZNF366Q8N895 744 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 DCAF4L2Q8NA75 395 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 ACTL9Q8TC94 416 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 ATG4AQ8WYN0 398 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 P3H4Q92791 437 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 EXOC4Q96A65 974 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 SHDQ96IW2 340 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 ACE2Q9BYF1 805 aaPredicted RBP14.02□□□□□ -0.17
CD44-224ENST00000526669 C10orf88Q9H8K7 445 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 LTB4R2Q9NPC1 389 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 ELOVL2Q9NXB9 296 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 SLC25A13Q9UJS0 675 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 HCN2Q9UL51 889 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 EFR3BQ9Y2G0 817 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 SAR1BQ9Y6B6 198 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 NUMA1Q14980 2115 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 MYLKQ15746 1914 aa14.02□□□□□ -0.17
CD44-224ENST00000526669 KMT2EQ8IZD2 1858 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 A0A0C4DFX4 3053 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 KANSL1LA0AUZ9 987 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 H7C0C1 242 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 KDELR3O43731 214 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 ZMPSTE24O75844 475 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 MT-CO1P00395 513 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 DRD1P21728 446 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 ETFBP38117 255 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 GARSP41250 739 aaKnown RBP14.01□□□□□ -0.17
CD44-224ENST00000526669 ATP5OP48047 213 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 PLK1P53350 603 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 STARD6P59095 220 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 AP1B1Q10567 949 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 DMC1Q14565 340 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 NOMO1Q15155 1222 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 SIX1Q15475 284 aaPredicted RBP14.01□□□□□ -0.17
CD44-224ENST00000526669 PREPLQ4J6C6 727 aaPredicted RBP14.01□□□□□ -0.17
CD44-224ENST00000526669 FNDC3BQ53EP0 1204 aaKnown RBP14.01□□□□□ -0.17
CD44-224ENST00000526669 C2orf27AQ580R0 203 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 NUDT18Q6ZVK8 323 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 SUGP1Q8IWZ8 645 aaKnown RBP14.01□□□□□ -0.17
CD44-224ENST00000526669 RASGEF1CQ8N431 466 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 CCNYQ8ND76 341 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 FLCNQ8NFG4 579 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 USP33Q8TEY7 942 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 UCMAQ8WVF2 138 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 C1orf54Q8WWF1 131 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 EDAQ92838 391 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 TTC17Q96AE7 1141 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 OLFM3Q96PB7 478 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 ACOX2Q99424 681 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 LGMNQ99538 433 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 C2orf49Q9BVC5 232 aaPredicted RBP14.01□□□□□ -0.17
CD44-224ENST00000526669 MFSD1Q9H3U5 465 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 PRDM16Q9HAZ2 1276 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 IPO11Q9UI26 975 aaKnown RBP14.01□□□□□ -0.17
CD44-224ENST00000526669 HPCAL4Q9UM19 191 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 ERVW-1Q9UQF0 538 aa14.01□□□□□ -0.17
CD44-224ENST00000526669 LRRK1Q38SD2 2015 aa14□□□□□ -0.17
CD44-224ENST00000526669 FAM170BA6NMN3 283 aa14□□□□□ -0.17
CD44-224ENST00000526669 K7ERQ8 282 aa14□□□□□ -0.17
CD44-224ENST00000526669 KIF2AO00139 706 aaPredicted RBP14□□□□□ -0.17
CD44-224ENST00000526669 PGRMC1O00264 195 aaKnown RBP14□□□□□ -0.17
CD44-224ENST00000526669 PRAMEF11O60813 436 aa14□□□□□ -0.17
CD44-224ENST00000526669 RNF40O75150 1001 aa14□□□□□ -0.17
CD44-224ENST00000526669 URI1O94763 535 aaPredicted RBP14□□□□□ -0.17
CD44-224ENST00000526669 HLA-EP13747 358 aa14□□□□□ -0.17
CD44-224ENST00000526669 VAV1P15498 845 aa14□□□□□ -0.17
CD44-224ENST00000526669 TNFRSF4P43489 277 aa14□□□□□ -0.17
CD44-224ENST00000526669 EIF3EP60228 445 aaKnown RBP14□□□□□ -0.17
CD44-224ENST00000526669 ECT2LQ008S8 904 aa14□□□□□ -0.17
CD44-224ENST00000526669 SNX1Q13596 522 aa14□□□□□ -0.17
CD44-224ENST00000526669 CCINQ13939 588 aa14□□□□□ -0.17
CD44-224ENST00000526669 ZNF234Q14588 700 aa14□□□□□ -0.17
CD44-224ENST00000526669 Q6ZS52 159 aa14□□□□□ -0.17
CD44-224ENST00000526669 ZNF513Q8N8E2 541 aaPredicted RBP14□□□□□ -0.17
CD44-224ENST00000526669 MRGPRX3Q96LB0 322 aa14□□□□□ -0.17
CD44-224ENST00000526669 AP1M1Q9BXS5 423 aa14□□□□□ -0.17
CD44-224ENST00000526669 MTG2Q9H4K7 406 aa14□□□□□ -0.17
CD44-224ENST00000526669 LMAN1LQ9HAT1 526 aa14□□□□□ -0.17
CD44-224ENST00000526669 CACNA2D2Q9NY47 1150 aa14□□□□□ -0.17
CD44-224ENST00000526669 SEPT10Q9P0V9 454 aa14□□□□□ -0.17
CD44-224ENST00000526669 UBA2Q9UBT2 640 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms