RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 PDK2Q15119 407 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 CYP51A1Q16850 503 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 MAP1SQ66K74 1059 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 ANKRD23Q86SG2 305 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 ADCK1Q86TW2 530 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 ATPAF2Q8N5M1 289 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 OR9I1Q8NGQ6 314 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 GIPC3Q8TF64 312 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 LENG1Q96BZ8 264 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 DCPSQ96C86 337 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 CEP19Q96LK0 163 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 ANKRD27Q96NW4 1050 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 THUMPD3Q9BV44 507 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 VPS33BQ9H267 617 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 OCEL1Q9H607 264 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 RUBCNLQ9H714 662 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 MINDY3Q9H8M7 445 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 POLR1BQ9H9Y6 1135 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 PALMDQ9NP74 551 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 KANSL3Q9P2N6 904 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 COPG2Q9UBF2 871 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 FAM50BQ9Y247 325 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 CHADO15335 359 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 STRNO43815 780 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 ALDH4A1P30038 563 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 LRPAP1P30533 357 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 EIF2B2P49770 351 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 RPL14P50914 215 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 HSD17B4P51659 736 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 PSME3P61289 254 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 TNFAIP2Q03169 654 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 STX5Q13190 355 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 DCTN2Q13561 401 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 LAMC2Q13753 1193 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 LSM12Q3MHD2 195 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 DALRD3Q5D0E6 543 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 TEDDM1Q5T9Z0 273 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 FAM219BQ5XKK7 198 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 FRA10AC1Q70Z53 315 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 PCYOX1LQ8NBM8 494 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 SLC4A11Q8NBS3 891 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 ULK4Q96C45 1275 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 NXNL1Q96CM4 212 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 C1orf50Q9BV19 199 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 TRIM15Q9C019 465 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 ROGDIQ9GZN7 287 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 FAM192AQ9GZU8 254 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 U3KQV3 271 aa7.07□□□□□ -1.28
TGFBR3-207ENST00000525962 SPEF2Q9C093 1822 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 KNL1Q8NG31 2342 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 HEATR9A2RTY3 570 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 KLRG2A4D1S0 409 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 A6NHS1 94 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 A8MX80 341 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 E5RI56 91 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 J3QRK9 145 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 CRTAMO95727 393 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 S100BP04271 92 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 NCK1P16333 377 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 ERCC2P18074 760 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 PITX1P78337 314 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 CCNA1P78396 465 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 IMPG1Q17R60 797 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 NOMO2Q5JPE7 1267 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 LRRC38Q5VT99 294 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 ABHD15Q6UXT9 468 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 TRIM74Q86UV6 250 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 TRIM73Q86UV7 250 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 STK32CQ86UX6 486 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 C11orf74Q86VG3 221 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 C12orf56Q8IXR9 622 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 ZNF398Q8TD17 642 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 FBXL8Q96CD0 374 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 DGCR14Q96DF8 476 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 SMAD5Q99717 465 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 SENP6Q9GZR1 1112 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 SDCBP2Q9H190 292 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 COQ10BQ9H8M1 238 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 NT5MQ9NPB1 228 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 RBM22Q9NW64 420 aaKnown RBP eCLIP7.06□□□□□ -1.283e-7■■■■■ 45.5
TGFBR3-207ENST00000525962 TUBGCP4Q9UGJ1 667 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 TMA7Q9Y2S6 64 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 PCDHA11Q9Y5I1 949 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 BCL9LQ86UU0 1499 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 MOXD2PA6NHM9 499 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 ADM5C9JUS6 153 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 DDHD2O94830 711 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 CCDC166P0CW27 439 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 YBX3P16989 372 aaKnown RBP eCLIP7.06□□□□□ -1.288e-7■■■□□ 15.9
TGFBR3-207ENST00000525962 TFEBP19484 476 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 ITGAXP20702 1163 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 LMO2P25791 158 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 DMPKQ09013 629 aa7.06□□□□□ -1.28
TGFBR3-207ENST00000525962 WASHC5Q12768 1159 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms