RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 CALN1Q9BXU9 219 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 ABCG4Q9H172 646 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 FZD3Q9NPG1 666 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 KLHL11Q9NVR0 708 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 NLGN3Q9NZ94 848 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 HEMK1Q9Y5R4 338 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
CCDC90B-205ENST00000525916 O00370 1275 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 LZTS3O60299 673 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 NEBLO76041 1014 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 SETSIPP0DME0 302 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 ALPPL2P10696 532 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 TGM2P21980 687 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 RBMS1P29558 406 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 NNMTP40261 264 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 PRCPP42785 496 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 TAS2R38P59533 333 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 NFIL3Q16649 462 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 ZNF542PQ5EBM4 170 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 C6orf132Q5T0Z8 1188 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 FOXR1Q6PIV2 292 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 IGF2-ASQ6U949 168 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 CCDC81Q6ZN84 652 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 EXD3Q8N9H8 876 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 OR13H1Q8NG92 308 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 DQX1Q8TE96 717 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 FRS2Q8WU20 508 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 OR8D1Q8WZ84 308 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 SLC46A1Q96NT5 459 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 FAM117AQ9C073 453 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 TJP2Q9UDY2 1190 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 MAPK8IP1Q9UQF2 711 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 ENTPD2Q9Y5L3 495 aa12.86□□□□□ -0.35
CCDC90B-205ENST00000525916 CDRT15L2A8MXV6 281 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 K7ESM1 405 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 RNGTTO60942 597 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 VDRP11473 427 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 PDGFRAP16234 1089 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 GTF2H1P32780 548 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 PPP1R2P41236 205 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 CLDN2P57739 230 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 NFKB2Q00653 900 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 ENPEPQ07075 957 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 CLN3Q13286 438 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 KLHL40Q2TBA0 621 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 RAP1GAP2Q684P5 730 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 PMF1Q6P1K2 205 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 DSG4Q86SJ6 1040 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 CHSY1Q86X52 802 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 CIR1Q86X95 450 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 SLC22A18ASQ8N1D0 253 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 IRGQQ8WZA9 623 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 SLC39A13Q96H72 371 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 PRR11Q96HE9 360 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 PREBQ9HCU5 417 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 TMEM63CQ9P1W3 806 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
CCDC90B-205ENST00000525916 UBR5O95071 2799 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 A0A1W2PQU0 124 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 C1QTNF3-AMACRE9PGA6 284 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 TERTO14746 1132 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 SCAMP1O15126 338 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 FYNP06241 537 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 TACR2P21452 398 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 DUSP3P51452 185 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 ADAM9Q13443 819 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 CUL2Q13617 745 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 CDKN3Q16667 212 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 ACCSLQ4AC99 568 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 CCDC183Q5T5S1 534 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 FAM46CQ5VWP2 391 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 OR6B2Q6IFH4 312 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 GUSBP11Q6P575 273 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 CRTC1Q6UUV9 634 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 GCNT7Q6ZNI0 430 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 Q6ZVU0 165 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 TAC4Q86UU9 113 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 SLC35F5Q8WV83 523 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 TFAP2BQ92481 460 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 ARRDC3Q96B67 414 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 MIS12Q9H081 205 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 EVA1BQ9NVM1 165 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 DNAJC28Q9NX36 388 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 PPM1HQ9ULR3 514 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 NAALADL1Q9UQQ1 740 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 PCDHGA8Q9Y5G5 932 aa12.84□□□□□ -0.35
CCDC90B-205ENST00000525916 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms