RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 HIPK3Q9H422 1215 aa4.41□□□□□ -1.7
CSDE1-210ENST00000525878 TBC1D3DA0A087WVF3 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3IA0A087WXS9 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3EA0A087X179 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3KA0A087X1G2 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 LOC102724159A0A0B4J2E5 919 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 PLSCR5A0PG75 271 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3BA6NDS4 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3FA6NER0 549 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-210ENST00000525878 SLC38A8A6NNN8 435 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3LB9A6J9 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3HP0C7X1 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TM4SF4P48230 202 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 NUDT6P53370 316 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 ALDH18A1P54886 795 aaKnown RBP4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TUBA1BP68363 451 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 BNC1Q01954 994 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 PWP2Q15269 919 aaKnown RBP4.4□□□□□ -1.71
CSDE1-210ENST00000525878 MPEG1Q2M385 716 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 ATG9BQ674R7 924 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3GQ6DHY5 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3CQ6IPX1 549 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 RINT1Q6NUQ1 792 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 SLC30A9Q6PML9 568 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 ANKS1BQ7Z6G8 1248 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 NRSN1Q8IZ57 195 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TBC1D3Q8IZP1 549 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-210ENST00000525878 OR14A16Q8NHC5 309 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 ARL15Q9NXU5 204 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 IGSF9Q9P2J2 1179 aa4.4□□□□□ -1.71
CSDE1-210ENST00000525878 TCRBV7S3A2A0A539 114 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 MBD3L5A6NJ08 208 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-210ENST00000525878 KIF28PB7ZC32 967 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 ASAP2O43150 1006 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 PLA2G6O60733 806 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 HOXB9P17482 250 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-210ENST00000525878 THPOP40225 353 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 SAFBQ15424 915 aaKnown RBP eCLIP4.39□□□□□ -1.71
CSDE1-210ENST00000525878 HLFQ16534 295 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 TRIM60Q495X7 471 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 COBLL1Q53SF7 1204 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 HEPHL1Q6MZM0 1159 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 FJX1Q86VR8 437 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 WDR75Q8IWA0 830 aaKnown RBP4.39□□□□□ -1.71
CSDE1-210ENST00000525878 TCP11L2Q8N4U5 519 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 ENDOVQ8N8Q3 282 aaKnown RBP4.39□□□□□ -1.71
CSDE1-210ENST00000525878 TMED6Q8WW62 240 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 ZNF333Q96JL9 665 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 INPP4AQ96PE3 977 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-210ENST00000525878 TP63Q9H3D4 680 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-210ENST00000525878 RETREG1Q9H6L5 497 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 Q9N2J8 555 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 FAM50BQ9Y247 325 aa4.39□□□□□ -1.71
CSDE1-210ENST00000525878 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 PMM2O15305 246 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 SOCS5O75159 536 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 IGLV2-11P01706 119 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 HSPA7P48741 367 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 IZUMO3Q5VZ72 239 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 MEX3BQ6ZN04 569 aaKnown RBP4.38□□□□□ -1.71
CSDE1-210ENST00000525878 HORMAD2Q8N7B1 307 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 TMEM120AQ9BXJ8 343 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 STK33Q9BYT3 514 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 SLC22A11Q9NSA0 550 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 TMEM248Q9NWD8 314 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 LZTS1Q9Y250 596 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 RAP2CQ9Y3L5 183 aa4.38□□□□□ -1.71
CSDE1-210ENST00000525878 IGHV4-28A0A0C4DH34 117 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-210ENST00000525878 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 RASA4BC9J798 803 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 APAF1O14727 1248 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 RASA4O43374 803 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 KCNJ13O60928 360 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 LARGE1O95461 756 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 CGAP01215 116 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 F7P08709 466 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-210ENST00000525878 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 NAGAP17050 411 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 PRPH2P23942 346 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 CYP2J2P51589 502 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 TMPRSS3P57727 454 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 SF3A3Q12874 501 aaKnown RBP eCLIP4.37□□□□□ -1.71
CSDE1-210ENST00000525878 MRGPRG-AS1Q2M3A8 158 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 ZNF569Q5MCW4 686 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 FAM171A1Q5VUB5 890 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 ZDHHC23Q8IYP9 409 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 OR2C3Q8N628 320 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 CEP76Q8TAP6 659 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 IPO4Q8TEX9 1081 aaKnown RBP4.37□□□□□ -1.71
CSDE1-210ENST00000525878 SLC35F5Q8WV83 523 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 C18orf8Q96DM3 657 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 RIPOR3Q96MK2 946 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 OCIAD1Q9NX40 245 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms