RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 GALNT11Q8NCW6 608 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 BBOF1Q8ND07 529 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 RBM15BQ8NDT2 890 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 BCAS4Q8TDM0 211 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 METTL21AQ8WXB1 218 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 THRSPQ92748 146 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 GRAMD1AQ96CP6 724 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 PRR11Q96HE9 360 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 COX4I2Q96KJ9 171 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 WDFY2Q96P53 400 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 NACC1Q96RE7 527 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 WRNIP1Q96S55 665 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 THUMPD2Q9BTF0 503 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 CACNG6Q9BXT2 260 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 MOV10L1Q9BXT6 1211 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 CPEB1Q9BZB8 566 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 PUS3Q9BZE2 481 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 RIBC2Q9H4K1 309 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 UNKLQ9H9P5 680 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 FSCN3Q9NQT6 498 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 AP5S1Q9NUS5 200 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 TMOD3Q9NYL9 352 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 WSB2Q9NYS7 404 aaPredicted RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 FTSJ1Q9UET6 329 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 CDH22Q9UJ99 828 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 AGO2Q9UKV8 859 aaKnown RBP4.63□□□□□ -1.67
CD44-213ENST00000525209 DISP3Q9P2K9 1392 aa4.63□□□□□ -1.67
CD44-213ENST00000525209 CEP170Q5SW79 1584 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 OOEPA6NGQ2 149 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 KIF28PB7ZC32 967 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 TEX22C9J3V5 150 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ACOT7O00154 380 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 EBAG9O00559 213 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 RASGRF2O14827 1237 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 IFIT3O14879 490 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 SYN3O14994 580 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 CETN3O15182 167 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ADAMDEC1O15204 470 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ZNF185O15231 689 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 GMFGO60234 142 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 GPRIN2O60269 458 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ZNF254O75437 659 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 TADA2AO75478 443 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 DNAJB5O75953 348 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 AKR7A3O95154 331 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 YEATS4O95619 227 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 FGFR1OPO95684 399 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 PTBP3O95758 552 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 PENKP01210 267 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 ITGB1P05556 798 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 URODP06132 367 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 S100A9P06702 114 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 MMP2P08253 660 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 CYC1P08574 325 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 C1SP09871 688 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ARP10275 920 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 UROSP10746 265 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 COX7A2P14406 83 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 DDCP20711 480 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 GALP22466 123 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 TCEA1P23193 301 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 GLRA2P23416 452 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 DNAJB1P25685 340 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 TAGLN2P37802 199 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 ASPAP45381 313 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 SLC6A11P48066 632 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 CCR3P51677 355 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 PMS2P54278 862 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 EPHB4P54760 987 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 MFAP4P55083 255 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 HADHBP55084 474 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 SNU13P55769 128 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 UCP3P55916 312 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 HAND2P61296 217 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 NOMO3P69849 1222 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 CD83Q01151 205 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 GOLGA8DPQ0D2H9 430 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 SF3A3Q12874 501 aaKnown RBP eCLIP4.62□□□□□ -1.67
CD44-213ENST00000525209 ADGRE1Q14246 886 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 IL11RAQ14626 422 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 CCDC57Q2TAC2 916 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 AARDQ4LEZ3 155 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 EMC4Q5J8M3 183 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 SPATA46Q5T0L3 261 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 GKAP1Q5VSY0 366 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 AP1ARQ63HQ0 302 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 NEK5Q6P3R8 708 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 LRSAM1Q6UWE0 723 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 CYP2R1Q6VVX0 501 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 B3GNT6Q6ZMB0 384 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ARMCX2Q7L311 632 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 DYMQ7RTS9 669 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ARHGAP12Q8IWW6 846 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 FMR1NBQ8N0W7 255 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 ZCCHC7Q8N3Z6 543 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 FSTL5Q8N475 847 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 AADATQ8N5Z0 425 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 BANPQ8N9N5 519 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 LINC00116Q8NCU8 138 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms