RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 CXorf49A8MYA2 514 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ATP9BO43861 1147 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 B4GALT3O60512 393 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 NBNO60934 754 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 FAM155BO75949 473 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 USP1O94782 785 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 RHOQP17081 205 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 FGFR3P22607 806 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 HOXC13P31276 330 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 SPRP35270 261 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-222ENST00000524006 GRIA1P42261 906 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 SERPINB4P48594 390 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ALDH7A1P49419 539 aaKnown RBP10.98□□□□□ -0.65
SPIDR-222ENST00000524006 GPR15P49685 360 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 GATMP50440 423 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 TMPRSS15P98073 1019 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ZBTB16Q05516 673 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ITKQ08881 620 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ZBTB17Q13105 803 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 SEPT6Q14141 434 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 SHHQ15465 462 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 TRIM60Q495X7 471 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 C9orf50Q5SZB4 431 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 GRTP1Q5TC63 336 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 TRMT10BQ6PF06 316 aaKnown RBP10.98□□□□□ -0.65
SPIDR-222ENST00000524006 CYS1Q717R9 158 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 SCD5Q86SK9 330 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 MIB1Q86YT6 1006 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 AGGF1Q8N302 714 aaeCLIP10.98□□□□□ -0.652e-6■■□□□ 12.5
SPIDR-222ENST00000524006 BBS5Q8N3I7 341 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.98□□□□□ -0.65
SPIDR-222ENST00000524006 PDZD8Q8NEN9 1154 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 IPMKQ8NFU5 416 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 RAB3IL1Q8TBN0 382 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ZNF398Q8TD17 642 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 MZB1Q8WU39 189 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 CCT6BQ92526 530 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 BTN2A3PQ96KV6 586 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 TEKT5Q96M29 485 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 CASD1Q96PB1 797 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 FICDQ9BVA6 458 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 PPP1R12CQ9BZL4 782 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 SLC13A1Q9BZW2 595 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 NMUR1Q9HB89 426 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 RXFP1Q9HBX9 757 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 CASS4Q9NQ75 786 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 ANLNQ9NQW6 1124 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 C20orf96Q9NUD7 363 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-222ENST00000524006 CLIC5Q9NZA1 410 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 MID2Q9UJV3 735 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 NUDT5Q9UKK9 219 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 MAGED2Q9UNF1 606 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-222ENST00000524006 GBF1Q92538 1859 aa10.98□□□□□ -0.65
SPIDR-222ENST00000524006 HELZP42694 1942 aaKnown RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 DENND4CQ5VZ89 1909 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 TRIM43BA6NCK2 446 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 KCNU1A8MYU2 1149 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 TIMM44O43615 452 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 USP12O75317 370 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 DNAJC8O75937 253 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 ATP5HO75947 161 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 HMBSP08397 361 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 TYK2P29597 1187 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 NDST2P52849 883 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 NIPAL4Q0D2K0 466 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 GPR17Q13304 367 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 VEPH1Q14D04 833 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 PSMD5Q16401 504 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 DBN1Q16643 649 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 UGP2Q16851 508 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 TAF1BQ53T94 588 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 PDPK2PQ6A1A2 396 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 KYAT3Q6YP21 454 aaKnown RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 DEFB128Q7Z7B8 93 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 KCNMB4Q86W47 210 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 NUDCD3Q8IVD9 361 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 ATAD1Q8NBU5 361 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 STKLD1Q8NE28 680 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 PPP4R1Q8TF05 950 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 BADQ92934 168 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 TRIM43Q96BQ3 446 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 THOC1Q96FV9 657 aaKnown RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 SPATA17Q96L03 361 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 RAB3IPQ96QF0 476 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 APOL2Q9BQE5 337 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 ECT2Q9H8V3 914 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 GLOD4Q9HC38 313 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 ABCF3Q9NUQ8 709 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 RBM22Q9NW64 420 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 PRKAG2Q9UGJ0 569 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 IPO11Q9UI26 975 aaKnown RBP10.97□□□□□ -0.65
SPIDR-222ENST00000524006 GRID1Q9ULK0 1009 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 HS3ST4Q9Y661 456 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 CHD5Q8TDI0 1954 aa10.97□□□□□ -0.65
SPIDR-222ENST00000524006 FAM237BA0A1B0GVD1 139 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms