RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 R3HDMLQ9H3Y0 253 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 MOV10Q9HCE1 1003 aaKnown RBP4.24□□□□□ -1.73
SKP1-212ENST00000523966 ENTPD7Q9NQZ7 604 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 IL1RAPL1Q9NZN1 696 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 KLHL13Q9P2N7 655 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 CNPY2Q9Y2B0 182 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 CYP2D7A0A087X1C5 515 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 C2CD4BA6NLJ0 364 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 RHODO00212 210 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 CHRM4P08173 479 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 ATP1A3P13637 1013 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 CD38P28907 300 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 ARL1P40616 181 aaPredicted RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 GEMIN4P57678 1058 aaKnown RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 INHBEP58166 350 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 MPP1Q00013 466 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 RHAGQ02094 409 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 ID2Q02363 134 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 ZNF91Q05481 1191 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 LMOD3Q0VAK6 560 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 PMPCAQ10713 525 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 MAPRE1Q15691 268 aaKnown RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 EDRF1Q3B7T1 1238 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 PLK5Q496M5 336 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 CEP78Q5JTW2 689 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 SLC9C2Q5TAH2 1124 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 VWA5B1Q5TIE3 1220 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 WDR78Q5VTH9 848 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 GJB7Q6PEY0 223 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 DSTYKQ6XUX3 929 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 ZNF793Q6ZN11 406 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 RTL10Q7L3V2 364 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 UBE2Q1Q7Z7E8 422 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 DNAJC10Q8IXB1 793 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 FAM185AQ8N0U4 392 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 DPP10Q8N608 796 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 TMEM217Q8N7C4 229 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 SCAIQ8N9R8 606 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 LSM14AQ8ND56 463 aaKnown RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 PRSS3P2Q8NHM4 247 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 TBC1D22AQ8WUA7 517 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 UCMAQ8WVF2 138 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 CENPIQ92674 756 aaPredicted RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 TEFMQ96QE5 360 aaKnown RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 FUZQ9BT04 418 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 GATA5Q9BWX5 397 aaPredicted RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 Q9N2J8 555 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 PDGFCQ9NRA1 345 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 PAPOLBQ9NRJ5 636 aaKnown RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 TMEM45AQ9NWC5 275 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 BEX4Q9NWD9 120 aaPredicted RBP4.23□□□□□ -1.73
SKP1-212ENST00000523966 HCN3Q9P1Z3 774 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 UPB1Q9UBR1 384 aa4.23□□□□□ -1.73
SKP1-212ENST00000523966 ITIH6Q6UXX5 1313 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 CCDC180Q9P1Z9 1646 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 COL11A2P13942 1736 aaPredicted RBP4.22□□□□□ -1.73
SKP1-212ENST00000523966 GAGE10A6NGK3 116 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 PER2O15055 1255 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 RTN3O95197 1032 aaPredicted RBP4.22□□□□□ -1.73
SKP1-212ENST00000523966 EPHB2P29323 1055 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 GGT5P36269 586 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 ARHGAP25P42331 645 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 MTNR1AP48039 350 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 NR1H2P55055 460 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 PROK1P58294 105 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 SLC18A3Q16572 532 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 TTC39AQ5SRH9 613 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 SLC18B1Q6NT16 456 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 AAGABQ6PD74 315 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 IL20RBQ6UXL0 311 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 C4orf50Q6ZRC1 276 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 B4GALNT4Q76KP1 1039 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 FAR1Q8WVX9 515 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 RAB40AQ8WXH6 277 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 RFFLQ8WZ73 363 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 ZBTB10Q96DT7 871 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 ZNF419Q96HQ0 510 aaPredicted RBP4.22□□□□□ -1.73
SKP1-212ENST00000523966 CLMNQ96JQ2 1002 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 CRAMP1Q96RY5 1269 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 SH2D3AQ9BRG2 576 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.22□□□□□ -1.73
SKP1-212ENST00000523966 EPHX3Q9H6B9 360 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 ACTR5Q9H9F9 607 aaPredicted RBP4.22□□□□□ -1.73
SKP1-212ENST00000523966 IL21RQ9HBE5 538 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 OLA1Q9NTK5 396 aaKnown RBP4.22□□□□□ -1.73
SKP1-212ENST00000523966 FLRT1Q9NZU1 646 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 PTGFRNQ9P2B2 879 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 C11orf21Q9P2W6 132 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 FBXO40Q9UH90 709 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 UTS2RQ9UKP6 389 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 ICKQ9UPZ9 632 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 LAMP3Q9UQV4 416 aa4.22□□□□□ -1.73
SKP1-212ENST00000523966 SMIM35A0A1B0GVV1 85 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 A0A1W2PPH5 198 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 ARHGAP10A1A4S6 786 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 FAM90A7PA6NKC0 464 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 TTC36A6NLP5 189 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 FAM90A22PA8MWA6 464 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 FAM90A12PA8MX19 464 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 FAM90A23PA8MXZ1 464 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms