RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SPACA3Q8IXA5 215 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 DCBLD1Q8N8Z6 715 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 LGMNQ99538 433 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 THAP9Q9H5L6 903 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 UBE2TQ9NPD8 197 aaPredicted RBP26.65■■□□□ 1.86
PVT1-219ENST00000523427 FZD3Q9NPG1 666 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 VPS28Q9UK41 221 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 PPM1HQ9ULR3 514 aa26.65■■□□□ 1.86
PVT1-219ENST00000523427 NYNRINQ9P2P1 1898 aaKnown RBP26.64■■□□□ 1.86
PVT1-219ENST00000523427 PMM2O15305 246 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 MED7O43513 233 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 GRAP2O75791 330 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 IGLV3-25P01717 112 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 NUDT1P36639 197 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 PLK1P53350 603 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 E2F1Q01094 437 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 TLE3Q04726 772 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 ZNF211Q13398 564 aaPredicted RBP26.64■■□□□ 1.86
PVT1-219ENST00000523427 TBC1D25Q3MII6 688 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 DEFB106AQ8N104 65 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 ZNF606Q8WXB4 792 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 FEM1AQ9BSK4 669 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 CALN1Q9BXU9 219 aa26.64■■□□□ 1.86
PVT1-219ENST00000523427 INTS2Q9H0H0 1204 aaKnown RBP26.64■■□□□ 1.86
PVT1-219ENST00000523427 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.63■■□□□ 1.85
PVT1-219ENST00000523427 A0A1W2PQU0 124 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 MCF2LO15068 1137 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 P4HA2O15460 535 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 ATP9BO43861 1147 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 DGKAP23743 735 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 CCR1P32246 355 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 OXCT1P55809 520 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 TAS2R38P59533 333 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 KCNH2Q12809 1159 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 ZNF177Q13360 481 aaPredicted RBP26.63■■□□□ 1.85
PVT1-219ENST00000523427 TTC39BQ5VTQ0 682 aaPredicted RBP26.63■■□□□ 1.85
PVT1-219ENST00000523427 ZNF605Q86T29 641 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 TMEM110Q86TL2 294 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 ERICH1Q86X53 443 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 STK32AQ8WU08 396 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 RFFLQ8WZ73 363 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 FAM131CQ96AQ9 280 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 ALG14Q96F25 216 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 DHTKD1Q96HY7 919 aaPredicted RBP26.63■■□□□ 1.85
PVT1-219ENST00000523427 PPP1R9BQ96SB3 815 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 OSBPL2Q9H1P3 480 aa26.63■■□□□ 1.85
PVT1-219ENST00000523427 KPNA3O00505 521 aaPredicted RBP26.62■■□□□ 1.85
PVT1-219ENST00000523427 MPOP05164 745 aa26.62■■□□□ 1.85
PVT1-219ENST00000523427 SLC2A3P11169 496 aa26.62■■□□□ 1.85
PVT1-219ENST00000523427 USP8P40818 1118 aa26.62■■□□□ 1.85
PVT1-219ENST00000523427 NME3Q13232 169 aa26.62■■□□□ 1.85
PVT1-219ENST00000523427 AUHQ13825 339 aaKnown RBP26.62■■□□□ 1.85
PVT1-219ENST00000523427 ZNF843Q8N446 348 aa26.62■■□□□ 1.85
PVT1-219ENST00000523427 SIK2Q9H0K1 926 aa26.62■■□□□ 1.85
PVT1-219ENST00000523427 ZNF462Q96JM2 2506 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 TEX51A0A1B0GUA7 166 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 GNA15P30679 374 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 CLDN2P57739 230 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 KCNMA1Q12791 1236 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 PDCLQ13371 301 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 ZNF542PQ5EBM4 170 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 SH2D3CQ8N5H7 860 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 SPATA20Q8TB22 786 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 NELFBQ8WX92 580 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 MUC3BQ9H195 1237 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 PREBQ9HCU5 417 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 KLHL11Q9NVR0 708 aa26.61■■□□□ 1.85
PVT1-219ENST00000523427 MT-CO1P00395 513 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 PLA2G2AP14555 144 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 STX17P56962 302 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 EIF4EBP2Q13542 120 aaPredicted RBP26.6■■□□□ 1.85
PVT1-219ENST00000523427 TAF1BQ53T94 588 aaPredicted RBP26.6■■□□□ 1.85
PVT1-219ENST00000523427 PIP5KL1Q5T9C9 394 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 C14orf80Q86SX3 495 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 PASD1Q8IV76 773 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 CACTIN-AS1Q8N1I8 211 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 ATP11CQ8NB49 1132 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 OR13H1Q8NG92 308 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 OR4C6Q8NH72 309 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 NOX5Q96PH1 765 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 HOOK1Q9UJC3 728 aaKnown RBP26.6■■□□□ 1.85
PVT1-219ENST00000523427 MAN1B1Q9UKM7 699 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 CNTN6Q9UQ52 1028 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 CTNND2Q9UQB3 1225 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 FARP1Q9Y4F1 1045 aaPredicted RBP26.6■■□□□ 1.85
PVT1-219ENST00000523427 HS3ST4Q9Y661 456 aa26.6■■□□□ 1.85
PVT1-219ENST00000523427 TDRD6O60522 2096 aaKnown RBP26.6■■□□□ 1.85
PVT1-219ENST00000523427 K7ERQ8 282 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 ALOX15BO15296 676 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 SNAP91O60641 907 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 PCDH8O95206 1070 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 AFPP02771 609 aaKnown RBP26.59■■□□□ 1.85
PVT1-219ENST00000523427 CTSLP07711 333 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 TTI2Q6NXR4 508 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 GJB7Q6PEY0 223 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 TMEM145Q8NBT3 493 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 ARRDC3Q96B67 414 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 DYRK4Q9NR20 520 aa26.59■■□□□ 1.85
PVT1-219ENST00000523427 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.59■■□□□ 1.85
PVT1-219ENST00000523427 CFAP46Q8IYW2 2715 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms