RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PHEXP78562 749 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 XRCC4Q13426 336 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 FAM182AQ5T1J6 154 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 CDCA2Q69YH5 1023 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 SCARA3Q6AZY7 606 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 GDF6Q6KF10 455 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 CPT1BQ92523 772 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 RXFP1Q9HBX9 757 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 MORF4L1Q9UBU8 362 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 SYCE1LA8MT33 242 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 H2AFYO75367 372 aaKnown RBP13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 TCF4P15884 667 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 PBX3P40426 434 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 STX5Q13190 355 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 CCDC153Q494R4 210 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 TXNRD3NBQ6F5E7 133 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 CRELD2Q6UXH1 353 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 POU5F2Q8N7G0 328 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 PRCCQ92733 491 aaPredicted RBP13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 SCLYQ96I15 445 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 ACBD6Q9BR61 282 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 NOD2Q9HC29 1040 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 TCF7L2Q9NQB0 619 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 HCRTO43612 131 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 TBL1XO60907 577 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 CRABP2P29373 138 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 WNT3AP56704 352 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 INPP5AQ14642 412 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZNF618Q5T7W0 954 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 ANKRD22Q5VYY1 191 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 FUT10Q6P4F1 479 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 OTOAQ7RTW8 1153 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 FAR2Q96K12 515 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 SLCO1B3Q9NPD5 702 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 GEMIN8Q9NWZ8 242 aaKnown RBP13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
PCDHGB1-201ENST00000523390 LRIG2O94898 1065 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 RPL17P18621 184 aaKnown RBP13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 NAGLUP54802 743 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 DAOAP59103 153 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CTBP1Q13363 440 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 OTOP2Q7RTS6 562 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 TAC4Q86UU9 113 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZBED3Q96IU2 234 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 ASAH2Q9NR71 780 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 ALADP13716 330 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 BOP1Q14137 746 aaKnown RBP13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 FLOT2Q14254 428 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CNGA3Q16281 694 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CA9Q16790 459 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 VARS2Q5ST30 1063 aaKnown RBP13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CERCAMQ5T4B2 595 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CCDC149Q6ZUS6 474 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 PTPRHQ9HD43 1115 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 MRGBPQ9NV56 204 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 GID8Q9NWU2 228 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 MYH11P35749 1972 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 FOXO6A8MYZ6 492 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CBX6O95503 412 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 THRAP10827 490 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZNF7P17097 686 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CCND1P24385 295 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 GABRR2P28476 465 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 PRKAA1Q13131 559 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 ARHGAP17Q68EM7 881 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 FBXO39Q8N4B4 442 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 EME1Q96AY2 570 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 CATSPER2Q96P56 530 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 NDNQ99608 321 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 SIX4Q9UIU6 781 aa13.28□□□□□ -0.28
PCDHGB1-201ENST00000523390 SLC41A1Q8IVJ1 513 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZC3H3Q8IXZ2 948 aaKnown RBP13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 PCDH19Q8TAB3 1148 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 BORCS6Q96GS4 357 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 TMEM237Q96Q45 408 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 FIZ1Q96SL8 496 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 NAV1Q8NEY1 1877 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 ABL2P42684 1182 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 PTGIRP43119 386 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 FAM187BQ17R55 369 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 AGKQ53H12 422 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 KYAT3Q6YP21 454 aaKnown RBP13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 TRABD2AQ86V40 505 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 GALNT4Q8N4A0 578 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 TRIM4Q9C037 500 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 ACTR8Q9H981 624 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 EFCAB1Q9HAE3 211 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 IL1RAPL1Q9NZN1 696 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 SRRDQ9UH36 339 aa13.27□□□□□ -0.28
PCDHGB1-201ENST00000523390 TRAV19A0A0A6YYK7 116 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms