RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 OR14C36Q8NHC7 312 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 BPIFA3Q9BQP9 254 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 NAT10Q9H0A0 1025 aaKnown RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 SEPT11Q9NVA2 429 aaKnown RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 TMEM51Q9NW97 253 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 VPS51Q9UID3 782 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 FZD4Q9ULV1 537 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 WASF3Q9UPY6 502 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 SNX11Q9Y5W9 270 aa19.17■□□□□ 0.66
SPIDR-220ENST00000522900 ASCC3Q8N3C0 2202 aaKnown RBP19.17■□□□□ 0.66
SPIDR-220ENST00000522900 FAM72CH0Y354 149 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 SMAD6O43541 496 aaKnown RBP19.16■□□□□ 0.66
SPIDR-220ENST00000522900 BNIP3LO60238 219 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 OR1E1P30953 314 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 SDC4P31431 198 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 SFSWAPQ12872 951 aaKnown RBP19.16■□□□□ 0.66
SPIDR-220ENST00000522900 SLC14A1Q13336 389 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 FAM72AQ5TYM5 149 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 FAM72DQ6L9T8 149 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 LRSAM1Q6UWE0 723 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 IRF2BP2Q7Z5L9 587 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 FAM72BQ86X60 149 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 ATP11CQ8NB49 1132 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 OR2T34Q8NGX1 318 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 OR8D1Q8WZ84 308 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 CENPIQ92674 756 aaPredicted RBP19.16■□□□□ 0.66
SPIDR-220ENST00000522900 OSGEPQ9NPF4 335 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 PPM1HQ9ULR3 514 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 HS3ST2Q9Y278 367 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 ANKRD6Q9Y2G4 727 aa19.16■□□□□ 0.66
SPIDR-220ENST00000522900 FNDC3AQ9Y2H6 1198 aaKnown RBP19.16■□□□□ 0.66
SPIDR-220ENST00000522900 A0A1W2PPC4 97 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 TCRBV5S1A1TA0A578 114 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 LRRC72A6NJI9 287 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 RNF103O00237 685 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 WNT9AO14904 365 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 MCF2LO15068 1137 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 RTN2O75298 545 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 RRM1P23921 792 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 PTPN9P43378 593 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 ADPRHP54922 357 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 HDAC4P56524 1084 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 GSCP56915 257 aaPredicted RBP19.15■□□□□ 0.66
SPIDR-220ENST00000522900 KRT83P78385 493 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 SIM1P81133 766 aaPredicted RBP19.15■□□□□ 0.66
SPIDR-220ENST00000522900 C6orf118Q5T5N4 469 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 ACBD5Q5T8D3 534 aaPredicted RBP19.15■□□□□ 0.66
SPIDR-220ENST00000522900 WDR59Q6PJI9 974 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 MON1BQ7L1V2 547 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 CCDC185Q8N715 623 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 BAP1Q92560 729 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 NAP1L5Q96NT1 182 aaPredicted RBP19.15■□□□□ 0.66
SPIDR-220ENST00000522900 FUCA2Q9BTY2 467 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 SPON2Q9BUD6 331 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 C2orf49Q9BVC5 232 aaPredicted RBP19.15■□□□□ 0.66
SPIDR-220ENST00000522900 ZYG11BQ9C0D3 744 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 OR12D3Q9UGF7 316 aa19.15■□□□□ 0.66
SPIDR-220ENST00000522900 ILVBLA1L0T0 632 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 SMTNL1A8MU46 457 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 CTSLP07711 333 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 ZNF165P49910 485 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 PPP2CBP62714 309 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 PPP2CAP67775 309 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 STRADAQ7RTN6 431 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 NAXDQ8IW45 347 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 DRC7Q8IY82 874 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 DCAF4L2Q8NA75 395 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 OR2A12Q8NGT7 310 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 PIP4K2CQ8TBX8 421 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 FAM172AQ8WUF8 416 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 FAM131CQ96AQ9 280 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 SLC6A18Q96N87 628 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 SYT11Q9BT88 431 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 SELENOOQ9BVL4 669 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 TM7SF3Q9NS93 570 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 NDFIP2Q9NV92 336 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 TAS2R14Q9NYV8 317 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 PPARGC1AQ9UBK2 798 aaKnown RBP19.14■□□□□ 0.65
SPIDR-220ENST00000522900 ACTL7AQ9Y615 435 aa19.14■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3DA0A087WVF3 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3IA0A087WXS9 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3EA0A087X179 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3KA0A087X1G2 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3FA6NER0 549 aaPredicted RBP19.13■□□□□ 0.65
SPIDR-220ENST00000522900 SIGLEC16A6NMB1 481 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3LB9A6J9 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 CBX4O00257 560 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 ZMPSTE24O75844 475 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 CER1O95813 267 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 WNT1P04628 370 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 CALB1P05937 261 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3HP0C7X1 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 FERP16591 822 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 GPD1P21695 349 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 GRIA4P48058 902 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 CCR5P51681 352 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 RPL7AP62424 266 aaKnown RBP19.13■□□□□ 0.65
SPIDR-220ENST00000522900 CNTN1Q12860 1018 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 IQCB1Q15051 598 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms