RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 RFPL3O75679 317 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 ASMTLO95671 621 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 APODP05090 189 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 CLTAP09496 248 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 CSH1P0DML2 217 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 CSH2P0DML3 217 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 NAT1P18440 290 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 CYP3A5P20815 502 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 CYP2F1P24903 491 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 RPA1P27694 616 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 KRT2P35908 639 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 EIF2DP41214 584 aaKnown RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 PRR5P85299 388 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 ATP2C1P98194 919 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 TLE3Q04726 772 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 DHCR24Q15392 516 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 PLEKHN1Q494U1 663 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 SPATA1Q5VX52 437 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 EGFLAMQ63HQ2 1017 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 GPR155Q7Z3F1 870 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 FBXO15Q8NCQ5 510 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 C2orf15Q8WU43 125 aaKnown RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 PEX11GQ96HA9 241 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 ZNF419Q96HQ0 510 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 ACOX2Q99424 681 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 JAM3Q9BX67 310 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 FAM124BQ9H5Z6 455 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 PLEKHA5Q9HAU0 1116 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 TRIM39Q9HCM9 518 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 SMPD4Q9NXE4 827 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 NDOR1Q9UHB4 597 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 PCDHA9Q9Y5H5 950 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 RAD54BQ9Y620 910 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 KNL1Q8NG31 2342 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 LRRK2Q5S007 2527 aa6.74□□□□□ -1.33
VPS13B-211ENST00000522802 UTP20O75691 2785 aaKnown RBP6.74□□□□□ -1.33
VPS13B-211ENST00000522802 BSNQ9UPA5 3926 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 A0A1B0GTW7 788 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 ANO9A1A5B4 782 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 MYMKA6NI61 221 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 PIRO00625 290 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 CYB561D2O14569 222 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 CLDN3O15551 220 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 CTDNEP1O95476 244 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 CRTAMO95727 393 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 CER1O95813 267 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 ZNF883P0CG24 379 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 GNSP15586 552 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 HDCP19113 662 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 ACAT1P24752 427 aaKnown RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 GRK2P25098 689 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 MCM7P33993 719 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 GRK3P35626 688 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 MATKP42679 507 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 MATR3P43243 847 aaKnown RBP eCLIP6.73□□□□□ -1.339e-6■■■■□ 23
VPS13B-211ENST00000522802 CXADRP78310 365 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 GUCY1A3Q02108 690 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 STRN3Q13033 797 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 PAK1Q13153 545 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 LY6DQ14210 128 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 SLC9A5Q14940 896 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 TCEA2Q15560 299 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 HLA-BQ31612 363 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 C10orf76Q5T2E6 689 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 RHBDF2Q6PJF5 856 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 LAYNQ6UX15 382 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 TMEM161BQ8NDZ6 487 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 PCDH19Q8TAB3 1148 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 TSPAN17Q96FV3 270 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 MRGPRX1Q96LB2 322 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 MAGEB10Q96LZ2 347 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 PKMYT1Q99640 499 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 ZDHHC5Q9C0B5 715 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 EPB41L1Q9H4G0 881 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 DDX19AQ9NUU7 478 aaKnown RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 CFAP97Q9P2B7 532 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 UXTQ9UBK9 157 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 NUDT5Q9UKK9 219 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 DSEQ9UL01 958 aa6.73□□□□□ -1.33
VPS13B-211ENST00000522802 COA3Q9Y2R0 106 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 TMA7Q9Y2S6 64 aaKnown RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 ANKRD17O75179 2603 aaKnown RBP6.73□□□□□ -1.33
VPS13B-211ENST00000522802 A0A1B0GVT2 93 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 FAM47E-STBD1D6RA91 191 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 E9PMD0 336 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 CBX4O00257 560 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 RRP8O43159 456 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TNFSF14O43557 240 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 XPOTO43592 962 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 SLC28A2O43868 658 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 NDUFS2O75306 463 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 ZNF217O75362 1048 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TULP3O75386 442 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 CDC45O75419 566 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 XBP1P17861 261 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 CCT6AP40227 531 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TNFRSF4P43489 277 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 IL9RQ01113 521 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms