RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 PIK3AP1Q6ZUJ8 805 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 PEG10Q86TG7 708 aaKnown RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 SLC44A2Q8IWA5 706 aaPredicted RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 CCDC117Q8IWD4 279 aaPredicted RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 BEND2Q8NDZ0 799 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 BICD2Q8TD16 824 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 ABHD5Q8WTS1 349 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 SLC22A17Q8WUG5 538 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 AFG1LQ8WV93 481 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 ESR2Q92731 530 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 C3orf49Q96BT1 292 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 EID2BQ96D98 161 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZDHHC12Q96GR4 267 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 C8orf76Q96K31 380 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 WDR24Q96S15 920 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 RTKNQ9BST9 563 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 KRT23Q9C075 422 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 COA1Q9GZY4 146 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 TP63Q9H3D4 680 aaPredicted RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 TAF1DQ9H5J8 278 aaPredicted RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 TDRD3Q9H7E2 651 aaKnown RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 VEZTQ9HBM0 779 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 PRDM8Q9NQV8 689 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 KLC4Q9NSK0 619 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 GGA3Q9NZ52 723 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 VPS54Q9P1Q0 977 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 RAPGEFL1Q9UHV5 662 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 HERC5Q9UII4 1024 aaKnown RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 KCND3Q9UK17 655 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 FEM1BQ9UK73 627 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 CNOT11Q9UKZ1 510 aaKnown RBP2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 VPS4AQ9UN37 437 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 CLIC4Q9Y696 253 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 DUOX1Q9NRD9 1551 aa2.98□□□□□ -1.93
CKS1BP7-201ENST00000522230 ASTN2O75129 1339 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 FLT1P17948 1338 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 WDR27A2RRH5 827 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 GOLGA6L4A6NEF3 574 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 RRN3P2A6NIE6 340 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 LINC00473A8K010 186 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 H0Y3Z8 333 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 PSMD14O00487 310 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 CES2O00748 559 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 MGST3O14880 152 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 PROM1O43490 865 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 EPB41L2O43491 1005 aaKnown RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 PMPCBO75439 489 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 BAG3O95817 575 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 GLP2RO95838 553 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 POLBP06746 335 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 LDHCP07864 332 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SLC3A2P08195 630 aaKnown RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 EBLN1P0CF75 366 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 TSPY3P0CV98 308 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 TSPY8P0CW00 308 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 TMEM225BP0DP42 221 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 AKR1B1P15121 316 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 CREB1P16220 341 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZFXP17010 805 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ALDH1B1P30837 517 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SLC16A2P36021 539 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ME1P48163 572 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SEC24CP53992 1094 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 NXPH1P58417 271 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 AP2B1P63010 937 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 AKAP17AQ02040 695 aaKnown RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 RNASELQ05823 741 aaKnown RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 PPFIA1Q13136 1202 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 PDCLQ13371 301 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 TRIM29Q14134 588 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ACOX1Q15067 660 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 STK38Q15208 465 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ALX1Q15699 326 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 CCDC96Q2M329 555 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SPATS1Q496A3 300 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 AASDHQ4L235 1098 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 MIIPQ5JXC2 388 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SPECC1Q5M775 1068 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 LY6G5CQ5SRR4 150 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 LAIR1Q6GTX8 287 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ISM2Q6H9L7 571 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ARMC6Q6NXE6 501 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 DLK2Q6UY11 383 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 Q6YL49 198 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SYT13Q7L8C5 426 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZNF627Q7L945 461 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 KRT73Q86Y46 540 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 P3H2Q8IVL5 708 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZNF444Q8N0Y2 327 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 FSIP1Q8NA03 581 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 CTHRC1Q96CG8 243 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 PGBD1Q96JS3 809 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZNF668Q96K58 619 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 UBXN10Q96LJ8 280 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 LENG8Q96PV6 779 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 TRAPPC9Q96Q05 1148 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 USP28Q96RU2 1077 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 EYA3Q99504 573 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 MACROD1Q9BQ69 325 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ZNF747Q9BV97 191 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms