RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ADRA1DP25100 572 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 MGAT5Q09328 741 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 MTA1Q13330 715 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 ANO4Q32M45 955 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 ALFQ53S48 1182 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 ZNF449Q6P9G9 518 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 ZNF276Q8N554 614 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 PDZD8Q8NEN9 1154 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 IGSF8Q969P0 613 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 PPP1R2P1Q96PQ5 205 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 APOL2Q9BQE5 337 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 SLC17A7Q9P2U7 560 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 DRGXA6NNA5 263 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 RFPL1O75677 317 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 ANXA9O76027 345 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 OAS1P00973 400 aaKnown RBP18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 CORO7P57737 925 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 CDH17Q12864 832 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 TMEM135Q86UB9 458 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 SLC39A11Q8N1S5 342 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 SPATA22Q8NHS9 363 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 ZNF461Q8TAF7 563 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 LRRC8CQ8TDW0 803 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 OVCA2Q8WZ82 227 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 TMEM169Q96HH4 297 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 RBM22Q9NW64 420 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 HSFX1Q9UBD0 423 aa18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 HBS1LQ9Y450 684 aaKnown RBP18.84■□□□□ 0.61
TRAPPC9-210ENST00000521667 MYO18AQ92614 2054 aaKnown RBP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 MAGEB16A2A368 324 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 HMX2A2RU54 273 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 TRIM43BA6NCK2 446 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 USP1O94782 785 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 ABLIM3O94929 683 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 SEC24AO95486 1093 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 HLA-DQB2P05538 268 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 ALADP13716 330 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 DNAJB2P25686 324 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 CCNFP41002 786 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 DSG1Q02413 1049 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 SF3A3Q12874 501 aaKnown RBP eCLIP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 CERCAMQ5T4B2 595 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 FAM117BQ6P1L5 589 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 CES3Q6UWW8 571 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 TMCO2Q7Z6W1 182 aaPredicted RBP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 TRIM43Q96BQ3 446 aaPredicted RBP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 ZNF669Q96BR6 464 aaPredicted RBP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 CERS2Q96G23 380 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 ZNF512Q96ME7 567 aaPredicted RBP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 FCRL3Q96P31 734 aaPredicted RBP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 PITPNM3Q9BZ71 974 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 IL22Q9GZX6 179 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 RC3H2Q9HBD1 1191 aaKnown RBP18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 DNMT3LQ9UJW3 386 aa18.83■□□□□ 0.61
TRAPPC9-210ENST00000521667 COPEO14579 308 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 NEBLO76041 1014 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 ATP5C1P36542 298 aaKnown RBP18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 DEFB103AP81534 67 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 DNAJC3Q13217 504 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 FRG1Q14331 258 aaKnown RBP18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 RNF187Q5TA31 235 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 MROH9Q5TGP6 573 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 SNX30Q5VWJ9 437 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 TPGS2Q68CL5 300 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 PACS1Q6VY07 963 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 RASSF3Q86WH2 238 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 CHSY1Q86X52 802 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 OTUD6BQ8N6M0 293 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 FATE1Q969F0 183 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 GRAMD1AQ96CP6 724 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 HMCESQ96FZ2 354 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 RPRD1AQ96P16 312 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 HERC2P3Q9BVR0 1158 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 TMEM106CQ9BVX2 250 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 C12orf65Q9H3J6 166 aaKnown RBP18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 ZFATQ9P243 1243 aa18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 USP15Q9Y4E8 981 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC9-210ENST00000521667 FAM237BA0A1B0GVD1 139 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 ATP9BO43861 1147 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 MT-CYBP00156 380 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 ETV4P43268 484 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 GEMP55040 296 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 ANKRD20A4Q4UJ75 823 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 TIFABQ6ZNK6 161 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 SPATA21Q7Z572 469 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 NECAB2Q7Z6G3 386 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 SPOCK2Q92563 424 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 TBL1YQ9BQ87 522 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 VPS11Q9H270 941 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 MKS1Q9NXB0 559 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 SLC17A6Q9P2U8 582 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 ZNF212Q9UDV6 495 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 GREB1Q4ZG55 1949 aa18.82■□□□□ 0.6
TRAPPC9-210ENST00000521667 NUP205Q92621 2012 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 ZNF840PA6NDX5 716 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 PEX11BO96011 259 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 TIMP1P01033 207 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 ERVK-10P10266 1014 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms