RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 SRCP12931 536 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 CD6P30203 668 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 SERPINH1P50454 418 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 CDO1Q16878 200 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 RAB6CQ53S08 254 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAM72AQ5TYM5 149 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAM72DQ6L9T8 149 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 LPCAT2Q7L5N7 544 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAM72BQ86X60 149 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 TXLNBQ8N3L3 684 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 ZNF564Q8TBZ8 553 aaPredicted RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 DNASE2BQ8WZ79 361 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 ARHGEF26Q96DR7 871 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 CHP1Q99653 195 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 RAB6CQ9H0N0 254 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 NOL6Q9H6R4 1146 aaKnown RBP9.69□□□□□ -0.86
CLK4-209ENST00000521621 FAM86C1Q9NVL1 165 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 VPS51Q9UID3 782 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 RAD54BQ9Y620 910 aa9.69□□□□□ -0.86
CLK4-209ENST00000521621 TMCO5BA8MYB1 307 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 PRR5-ARHGAP8B1AHC4 643 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 H3BRJ5 948 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 PJA2O43164 708 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 ZNF806P0C7X5 589 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 CYLC1P35663 651 aaPredicted RBP9.68□□□□□ -0.86
CLK4-209ENST00000521621 CCR5P51681 352 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 SUOXP51687 545 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 ADKP55263 362 aaKnown RBP9.68□□□□□ -0.86
CLK4-209ENST00000521621 ARHGAP8P85298 464 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 HADHQ16836 314 aaKnown RBP9.68□□□□□ -0.86
CLK4-209ENST00000521621 FAM46CQ5VWP2 391 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 RFX8Q6ZV50 586 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 CEP76Q8TAP6 659 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 BHMTQ93088 406 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 SIPA1Q96FS4 1042 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 DEF6Q9H4E7 631 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 PDFQ9HBH1 243 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 TMPRSS4Q9NRS4 437 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 VPS45Q9NRW7 570 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 VPS28Q9UK41 221 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 PPM1HQ9ULR3 514 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 ANTXRLA6NF34 631 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 RAMP2O60895 175 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 KRT7P08729 469 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 GOT1P17174 413 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 ZNF33AQ06730 810 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 CCDC15Q0P6D6 951 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 SERINC3Q13530 473 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 GRM3Q14832 879 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 TTC31Q49AM3 519 aaPredicted RBP9.68□□□□□ -0.86
CLK4-209ENST00000521621 RALGPS1Q5JS13 557 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 ANO7Q6IWH7 933 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 NEK5Q6P3R8 708 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 CEP68Q76N32 757 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 CIR1Q86X95 450 aaPredicted RBP9.68□□□□□ -0.86
CLK4-209ENST00000521621 TMPRSS6Q8IU80 811 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 CYB5D2Q8WUJ1 264 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 KCTD15Q96SI1 283 aaPredicted RBP9.68□□□□□ -0.86
CLK4-209ENST00000521621 ZNF670Q9BS34 389 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 MKRN2Q9H000 416 aaKnown RBP9.68□□□□□ -0.86
CLK4-209ENST00000521621 MUC3BQ9H195 1237 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 BCCIPQ9P287 314 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLK4-209ENST00000521621 ANAPC7Q9UJX3 599 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 F5P12259 2224 aa9.68□□□□□ -0.86
CLK4-209ENST00000521621 DCLK1O15075 740 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
CLK4-209ENST00000521621 SIN3BO75182 1162 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 ZNF821O75541 412 aaPredicted RBP9.67□□□□□ -0.86
CLK4-209ENST00000521621 CD160O95971 181 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 CTSOP43234 321 aaPredicted RBP9.67□□□□□ -0.86
CLK4-209ENST00000521621 TPMTP51580 245 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 TPI1P60174 286 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 ARF5P84085 180 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 C11orf63Q6NUN7 778 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 HMGB4Q8WW32 186 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 SORCS1Q8WY21 1168 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 HDAC8Q9BY41 377 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 ZWILCHQ9H900 591 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 MPP6Q9NZW5 540 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 SNX10Q9Y5X0 201 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 CEP192Q8TEP8 1941 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 PCDH15Q96QU1 1955 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 EEF2KO00418 725 aaKnown RBP9.67□□□□□ -0.86
CLK4-209ENST00000521621 SRGAP2O75044 1071 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 GSDMDP57764 484 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 LMNB2Q03252 620 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 POLD3Q15054 466 aaPredicted RBP9.67□□□□□ -0.86
CLK4-209ENST00000521621 CST6Q15828 149 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 TAZQ16635 292 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 SLC23A3Q6PIS1 610 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 ZNF662Q6ZS27 426 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 PHLDB2Q86SQ0 1253 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 ASB12Q8WXK4 309 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 OSBPL1AQ9BXW6 950 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 CPEB1Q9BZB8 566 aaKnown RBP9.67□□□□□ -0.86
CLK4-209ENST00000521621 MYO1AQ9UBC5 1043 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 AMACRQ9UHK6 382 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 PILRBQ9UKJ0 227 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms