RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 IPO11Q9UI26 975 aaKnown RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 ZNF510Q9Y2H8 683 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 UTP11Q9Y3A2 253 aaKnown RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 VCANP13611 3396 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 NEDD8-MDP1E9PL57 170 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 LUC7L3O95232 432 aaKnown RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 METTL18O95568 372 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 PEX11BO96011 259 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 PTPN3P26045 913 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ADCY8P40145 1251 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 MAPKAPK2P49137 400 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 NDST2P52849 883 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 GNA12Q03113 381 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 GAD2Q05329 585 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ZNF177Q13360 481 aaPredicted RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 CUL1Q13616 776 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 SKIV2LQ15477 1246 aaKnown RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 ACBD5Q5T8D3 534 aaPredicted RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 RNF219Q5W0B1 726 aaPredicted RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 RHBDF2Q6PJF5 856 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 CHST9Q7L1S5 443 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 CCDC13Q8IYE1 715 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ZNF567Q8N184 647 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 MREGQ8N565 214 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ARHGEF2Q92974 986 aaKnown RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 RTP4Q96DX8 246 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 RUNDC3BQ96NL0 473 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 SH3GL2Q99962 352 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 SPON2Q9BUD6 331 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 PCDH9Q9HC56 1237 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 TBC1D30Q9Y2I9 924 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 TCRBV7S3A2A0A539 114 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 HACD1B0YJ81 288 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 H0Y626 953 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 RHOCP08134 193 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 LAMP2P13473 410 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 TCF3P15923 654 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 MX2P20592 715 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 CD70P32970 193 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 CHKAP35790 457 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 ANO4Q32M45 955 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 ALS2CLQ60I27 953 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 BZW1Q7L1Q6 419 aaKnown RBP15.38■□□□□ 0.05
SREK1-209ENST00000520953 NAT16Q8N8M0 369 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 TTC8Q8TAM2 541 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 SUSD6Q92537 303 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 IRF7Q92985 503 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 RIPOR3Q96MK2 946 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 EBF3Q9H4W6 596 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 SPHK2Q9NRA0 654 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 DUS2Q9NX74 493 aaKnown RBP15.38■□□□□ 0.05
SREK1-209ENST00000520953 PSD3Q9NYI0 1048 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 CD207Q9UJ71 328 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 ZMYM5Q9UJ78 669 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 SNAP91O60641 907 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 JCHAINP01591 159 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 WEE1P30291 646 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 CSKP41240 450 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 SERINC3Q13530 473 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 HLTFQ14527 1009 aaKnown RBP eCLIP15.38■□□□□ 0.053e-7■□□□□ 8.9
SREK1-209ENST00000520953 EML3Q32P44 896 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 MPPE1Q53F39 396 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 ANKRD22Q5VYY1 191 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 MFN1Q8IWA4 741 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 APCDD1Q8J025 514 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 DEFB123Q8N688 67 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 CNTD1Q8N815 330 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 BPIFB1Q8TDL5 484 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.38■□□□□ 0.05
SREK1-209ENST00000520953 AGAP3Q96P47 875 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 ZIM3Q96PE6 472 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 BBS2Q9BXC9 721 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 RAB17Q9H0T7 212 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 FEZ2Q9UHY8 353 aaPredicted RBP15.38■□□□□ 0.05
SREK1-209ENST00000520953 RAD54BQ9Y620 910 aa15.38■□□□□ 0.05
SREK1-209ENST00000520953 TTC24A2A3L6 582 aaPredicted RBP15.37■□□□□ 0.05
SREK1-209ENST00000520953 GJB3O75712 270 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 CYP17A1P05093 508 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 STIP1P31948 543 aaKnown RBP15.37■□□□□ 0.05
SREK1-209ENST00000520953 CD68P34810 354 aaPredicted RBP15.37■□□□□ 0.05
SREK1-209ENST00000520953 PLTPP55058 493 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 LMNB2Q03252 620 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 MESP2Q0VG99 397 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 LMAN2Q12907 356 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 MTM1Q13496 603 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 CDH18Q13634 790 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 ANKRD20A2Q5SQ80 823 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 ANKRD20A1Q5TYW2 823 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 ANKRD20A3Q5VUR7 823 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 NAIF1Q69YI7 327 aaPredicted RBP15.37■□□□□ 0.05
SREK1-209ENST00000520953 IL31Q6EBC2 164 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 OSCP1Q8WVF1 389 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 TSGA13Q96PP4 275 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 GORASP1Q9BQQ3 440 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 MUC3BQ9H195 1237 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 UBE2ZQ9H832 354 aaPredicted RBP15.37■□□□□ 0.05
SREK1-209ENST00000520953 KIF9Q9HAQ2 790 aa15.37■□□□□ 0.05
SREK1-209ENST00000520953 TRPV4Q9HBA0 871 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms