RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 IGFBP2P18065 325 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 PSMA4P25789 261 aaKnown RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 HOXD9P28356 352 aaPredicted RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 GRK5P34947 590 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 PGM1P36871 562 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 ARL1P40616 181 aaPredicted RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 GPD2P43304 727 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 CPA2P48052 419 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 FOXL2P58012 376 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 WDR5P61964 334 aaKnown RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 CFHR1Q03591 330 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 BFSP2Q13515 415 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 STIM1Q13586 685 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 THOC5Q13769 683 aaKnown RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 CAMK1Q14012 370 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 KPNB1Q14974 876 aaKnown RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 SEC23BQ15437 767 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 ZNF484Q5JVG2 852 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 CCDC30Q5VVM6 783 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3GQ6DHY5 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3CQ6IPX1 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 WDR93Q6P2C0 686 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TMEM88Q6PEY1 159 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 INO80CQ6PI98 192 aaPredicted RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 ARMC8Q8IUR7 673 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3Q8IZP1 549 aaPredicted RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 GPATCH11Q8N954 259 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 MCRS1Q96EZ8 462 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 CHCHD6Q9BRQ6 235 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 WACQ9BTA9 647 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 FOXP1Q9H334 677 aaPredicted RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 PLEKHA2Q9HB19 425 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TMEM184CQ9NVA4 438 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 SPATA31A1Q5TZJ5 1347 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 CNTNAP2Q9UHC6 1331 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 GOLGA6L10A0A0M3HER8 536 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 TTC34A8MYJ7 566 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 M0QZQ0 153 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 TLR2O60603 784 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 PRAMEF2O60811 474 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 ZBED4O75132 1171 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 GFPT2O94808 682 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 CSF1P09603 554 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 HNRNPA1P09651 372 aaKnown RBP eCLIP4.44□□□□□ -1.7
SQLE-204ENST00000520493 CTSAP10619 480 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 CYP19A1P11511 503 aaPredicted RBP4.44□□□□□ -1.7
SQLE-204ENST00000520493 CHMP24386 653 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 GALNSP34059 522 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 RAD52P43351 418 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 ME1P48163 572 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 RCAN1P53805 252 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 YPEL5P62699 121 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 GPR68Q15743 365 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 CNGA3Q16281 694 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 SLC9C2Q5TAH2 1124 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 ZNF793Q6ZN11 406 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 UBE2Q1Q7Z7E8 422 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 ARFGAP1Q8N6T3 406 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D22AQ8WUA7 517 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 RNF125Q96EQ8 232 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 NUDT16L1Q9BRJ7 211 aaKnown RBP4.44□□□□□ -1.7
SQLE-204ENST00000520493 TRMOQ9BU70 441 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 LMAN2LQ9H0V9 348 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 TAOK3Q9H2K8 898 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 CDCP1Q9H5V8 836 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 SMYD2Q9NRG4 433 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 AASSQ9UDR5 926 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 CNOT7Q9UIV1 285 aaKnown RBP4.44□□□□□ -1.7
SQLE-204ENST00000520493 CD207Q9UJ71 328 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 ARHGAP26Q9UNA1 814 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 SLC12A4Q9UP95 1085 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 HS3ST3B1Q9Y662 390 aa4.44□□□□□ -1.7
SQLE-204ENST00000520493 LY6G6EA0A0G2JKS1 128 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 FAM90A10PA6NDY2 464 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 GAGE10A6NGK3 116 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 KLK10O43240 276 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 ANP32CO43423 234 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 CNOT3O75175 753 aaKnown RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 RTN3O95197 1032 aaPredicted RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 NTN1O95631 604 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 ALDOAP04075 364 aaKnown RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 SLC12A2P55011 1212 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 FOXG1P55316 489 aaPredicted RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 PDCLQ13371 301 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 PRICKLE4Q2TBC4 344 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 SLC45A4Q5BKX6 768 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 ANKRD40Q6AI12 368 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 IRF2BP2Q7Z5L9 587 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 PIM3Q86V86 326 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 UEVLDQ8IX04 471 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 ADPRHL1Q8NDY3 354 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 SRFBP1Q8NEF9 429 aaKnown RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 TDRD7Q8NHU6 1098 aaKnown RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 NOC3LQ8WTT2 800 aaKnown RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 UCMAQ8WVF2 138 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 ZUFSPQ96AP4 578 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 ARRDC3Q96B67 414 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms