RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ADAMTS1Q9UHI8 967 aa16.56■□□□□ 0.24
IGHV3-42-201ENST00000520410 NYNRINQ9P2P1 1898 aaKnown RBP16.56■□□□□ 0.24
IGHV3-42-201ENST00000520410 RRM1P23921 792 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 SDC4P31431 198 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 SOX5P35711 763 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 SCNN1AP37088 669 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 GRK6P43250 576 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 GABRB2P47870 512 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 COPB1P53618 953 aaKnown RBP16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 ARL13BQ3SXY8 428 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 SMYD5Q6GMV2 418 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 RWDD4Q6NW29 188 aaKnown RBP16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 ZNF677Q86XU0 584 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 ZNF354CQ86Y25 554 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 SLC30A5Q8TAD4 765 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 GRIN3AQ8TCU5 1115 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 FRS2Q8WU20 508 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 TNKS2Q9H2K2 1166 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 ATP13A1Q9HD20 1204 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 ANLNQ9NQW6 1124 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 GDF3Q9NR23 364 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 FTSJ1Q9UET6 329 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 VPS51Q9UID3 782 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 WASF3Q9UPY6 502 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 BTBD3Q9Y2F9 522 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 MSRB2Q9Y3D2 182 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 GON4LQ3T8J9 2241 aa16.55■□□□□ 0.24
IGHV3-42-201ENST00000520410 ASCC3Q8N3C0 2202 aaKnown RBP16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 TMEM8BA6NDV4 472 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 VILLO15195 856 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 ATP9BO43861 1147 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 ITGAVP06756 1048 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 SRCP12931 536 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 CTSKP43235 329 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 NSFP46459 744 aaKnown RBP16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 CCR5P51681 352 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 CDR2Q01850 454 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 MYL5Q02045 173 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 UBXN1Q04323 297 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 CNTN1Q12860 1018 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 KCNT1Q5JUK3 1230 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 CDKAL1Q5VV42 579 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 DPY19L2P1Q6NXN4 242 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 GATAD2AQ86YP4 633 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 RYBPQ8N488 228 aaPredicted RBP16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 OR7D4Q8NG98 312 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 GATA6Q92908 595 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 ALG14Q96F25 216 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 ZYG11BQ9C0D3 744 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 SARDHQ9UL12 918 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 TBC1D30Q9Y2I9 924 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 PCDHGB2Q9Y5G2 931 aa16.54■□□□□ 0.24
IGHV3-42-201ENST00000520410 PLXNA2O75051 1894 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 A0A0D9SEW6 157 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 K7ERQ8 282 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 GJB6O95452 261 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 ATXN1LP0C7T5 689 aaKnown RBP16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 DRD3P35462 400 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 STAT4Q14765 748 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 C15orf59Q2T9L4 293 aaPredicted RBP16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 NAPEPLDQ6IQ20 393 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 RAB44Q7Z6P3 723 aaPredicted RBP16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 SETD3Q86TU7 594 aaPredicted RBP16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 DCAF4L2Q8NA75 395 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 RXFP2Q8WXD0 754 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 ADAMTS14Q8WXS8 1223 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 KLK6Q92876 244 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 PGAP3Q96FM1 320 aaPredicted RBP16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 PSMB7Q99436 277 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 ELF4Q99607 663 aaPredicted RBP16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 NOCTQ9UK39 431 aaKnown RBP16.53■□□□□ 0.24
IGHV3-42-201ENST00000520410 CNOT1A5YKK6 2376 aaKnown RBP16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 NUMA1Q14980 2115 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 ANKRD62A6NC57 917 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 MCF2LO15068 1137 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 EPHB6O15197 1021 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 ALOX15BO15296 676 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 SLC7A4O43246 635 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 PLRG1O43660 514 aaKnown RBP16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 DFNA5O60443 496 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 CBFA2T3O75081 653 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 MT-CO1P00395 513 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 WNT1P04628 370 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 GLDCP23378 1020 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 CHRNA3P32297 505 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 ARRB1P49407 418 aaPredicted RBP16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 FMO1Q01740 532 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 CCDC15Q0P6D6 951 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 SETMARQ53H47 684 aaPredicted RBP16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 ACBD5Q5T8D3 534 aaPredicted RBP16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 TRNP1Q6NT89 227 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 RETSATQ6NUM9 610 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 C22orf39Q6P5X5 142 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 TRIM72Q6ZMU5 477 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 SLCO6A1Q86UG4 719 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 AOPEPQ8N6M6 819 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 PPP1R16AQ96I34 528 aa16.52■□□□□ 0.24
IGHV3-42-201ENST00000520410 ORAI3Q9BRQ5 295 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms