RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 MYLK2Q9H1R3 596 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 C20orf96Q9NUD7 363 aaPredicted RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 NSMCE4AQ9NXX6 385 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 CLIC5Q9NZA1 410 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 MPP6Q9NZW5 540 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 SOX13Q9UN79 622 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 MAGED2Q9UNF1 606 aaPredicted RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 NYNRINQ9P2P1 1898 aaKnown RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 A0A0G2JND7 137 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 CCDC195A0A1B0GUA6 201 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 MTMR11A4FU01 709 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 CACNG3O60359 315 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 RASSF9O75901 435 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 RHOQP17081 205 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 TPH1P17752 444 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 TYK2P29597 1187 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 PAPOLAP51003 745 aaKnown RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 APLP1P51693 650 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 ARFIP2P53365 341 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 GPR17Q13304 367 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 CHI3L2Q15782 390 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 ACBD5Q5T8D3 534 aaPredicted RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 PIK3R6Q5UE93 754 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 AFMIDQ63HM1 303 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 STRA8Q7Z7C7 330 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 C14orf80Q86SX3 495 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 TBC1D1Q86TI0 1168 aaPredicted RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 KCNMB4Q86W47 210 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 TTC9BQ8N6N2 239 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 CNTD1Q8N815 330 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 PPHLN1Q8NEY8 458 aaKnown RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 IPMKQ8NFU5 416 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 RFWD2Q8NHY2 731 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 SH3TC2Q8TF17 1288 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 ZNF296Q8WUU4 475 aaPredicted RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 NSMCE1Q8WV22 266 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 DPF3Q92784 378 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 SLC39A13Q96H72 371 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 BTN2A3PQ96KV6 586 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 SPATA17Q96L03 361 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 RBBP8Q99708 897 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 MECRQ9BV79 373 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 FICDQ9BVA6 458 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 FSD1LQ9BXM9 530 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 KLC4Q9NSK0 619 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 RBM22Q9NW64 420 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 MARCH5Q9NX47 278 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 IL37Q9NZH6 218 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 IL1RAPL1Q9NZN1 696 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 MARCH2Q9P0N8 246 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 ZFP69BQ9UJL9 534 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 CHKBQ9Y259 395 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 SLC27A5Q9Y2P5 690 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 MTO1Q9Y2Z2 717 aaKnown RBP8.59□□□□□ -1.03
HMGB4-203ENST00000519684 PSAT1Q9Y617 370 aa8.59□□□□□ -1.03
HMGB4-203ENST00000519684 TANC1Q9C0D5 1861 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 SLC12A8A0AV02 714 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 TIMM44O43615 452 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 PQBP1O60828 265 aaKnown RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 SOAT2O75908 522 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 ALDOAP04075 364 aaKnown RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 BPGMP07738 259 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 HAPLN1P10915 354 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 NQO1P15559 274 aaKnown RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 NDST2P52849 883 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 CSE1LP55060 971 aaKnown RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 ZBTB16Q05516 673 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 TAF10Q12962 218 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 MTA1Q13330 715 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 PSMD5Q16401 504 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 MS4A13Q5J8X5 152 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 PCID2Q5JVF3 399 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 PDPK2PQ6A1A2 396 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 CYB5D1Q6P9G0 228 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 ZNF354CQ86Y25 554 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 MIB1Q86YT6 1006 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 KLHDC8BQ8IXV7 354 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 LRRC43Q8N309 656 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 SPATA22Q8NHS9 363 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 ZSCAN18Q8TBC5 510 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 C7orf26Q96N11 449 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 TTPALQ9BTX7 342 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 SIRPGQ9P1W8 387 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 PPARGC1AQ9UBK2 798 aaKnown RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 IPO11Q9UI26 975 aaKnown RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 ZCWPW2A0A1B0GU75 182 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 FAM92AA1XBS5 289 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 UNC5CO95185 931 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 MPOP05164 745 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 HLA-DQB2P05538 268 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 GALTP07902 379 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 HMBSP08397 361 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 HNRNPH1P31943 449 aaKnown RBP8.58□□□□□ -1.04
HMGB4-203ENST00000519684 RASSF2P50749 326 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 RENBPP51606 427 aa8.58□□□□□ -1.04
HMGB4-203ENST00000519684 KPNA1P52294 538 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms