RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 C14orf80Q86SX3 495 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 EXOC3L1Q86VI1 746 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 CHSY1Q86X52 802 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 ZNF567Q8N184 647 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 ATP11CQ8NB49 1132 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 ITFG1Q8TB96 612 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 LRCH3Q96II8 777 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 RABGEF1Q9UJ41 708 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 MTCH2Q9Y6C9 303 aa14.83□□□□□ -0.04
CLN8-204ENST00000519254 NOTCH4Q99466 2003 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 TMEM265A0A087WTH1 108 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 EXOC1LA0A1B0GW35 172 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 A6NNZ2 444 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 FOXO6A8MYZ6 492 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 ZNF197O14709 1029 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 CDH16O75309 829 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 STK10O94804 968 aaKnown RBP14.82□□□□□ -0.04
CLN8-204ENST00000519254 KLKB1P03952 638 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 TSHRP16473 764 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 HTR7P34969 479 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 FDFT1P37268 417 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 GARSP41250 739 aaKnown RBP14.82□□□□□ -0.04
CLN8-204ENST00000519254 MAGEA3P43357 314 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 SLC11A2P49281 568 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 MLLT6P55198 1093 aaPredicted RBP14.82□□□□□ -0.04
CLN8-204ENST00000519254 ZXDBP98169 803 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 NRG1Q02297 640 aaPredicted RBP14.82□□□□□ -0.04
CLN8-204ENST00000519254 ADGRE1Q14246 886 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 CBX2Q14781 532 aaPredicted RBP14.82□□□□□ -0.04
CLN8-204ENST00000519254 TUBB8Q3ZCM7 444 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 NADSYN1Q6IA69 706 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 C3orf62Q6ZUJ4 267 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 ZNF771Q7L3S4 317 aaPredicted RBP14.82□□□□□ -0.04
CLN8-204ENST00000519254 HDAC11Q96DB2 347 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 TBC1D31Q96DN5 1066 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 CEP41Q9BYV8 373 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 BRD8Q9H0E9 1235 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 TASP1Q9H6P5 420 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 CLDND1Q9NY35 253 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 SEPT10Q9P0V9 454 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 CFAP97Q9P2B7 532 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 CHMP2BQ9UQN3 213 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 C2orf16Q68DN1 1984 aa14.82□□□□□ -0.04
CLN8-204ENST00000519254 TRIOBPQ9H2D6 2365 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 KCNK1O00180 336 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 ACSL4O60488 711 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 MX2P20592 715 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 PTPN3P26045 913 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 DDX6P26196 483 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLN8-204ENST00000519254 SERPINB6P35237 376 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 SLC7A9P82251 487 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 RFWD3Q6PCD5 774 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 LRRC31Q6UY01 552 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 TMEM184AQ6ZMB5 413 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 TDRPQ86YL5 185 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 PALM2Q8IXS6 379 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 CMTM8Q8IZV2 173 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 ADAMTS19Q8TE59 1207 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 DEPDC1BQ8WUY9 529 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 MAML1Q92585 1016 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 ARHGEF2Q92974 986 aaKnown RBP14.81□□□□□ -0.04
CLN8-204ENST00000519254 CELF6Q96J87 481 aaKnown RBP14.81□□□□□ -0.04
CLN8-204ENST00000519254 C1orf74Q96LT6 269 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 ZSWIM3Q96MP5 696 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 FERMT1Q9BQL6 677 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 LMCD1Q9NZU5 365 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 MPP6Q9NZW5 540 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 AGO1Q9UL18 857 aaKnown RBP14.81□□□□□ -0.04
CLN8-204ENST00000519254 CCL26Q9Y258 94 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 SH3BP1Q9Y3L3 701 aa14.81□□□□□ -0.04
CLN8-204ENST00000519254 F5H423 210 aaPredicted RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 TRDMT1O14717 391 aaKnown RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 TACR2P21452 398 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 SLC6A4P31645 630 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 PHBP35232 272 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 GRIA1P42261 906 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 ADAM15Q13444 863 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 FBXL22Q6P050 247 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 SYCE2Q6PIF2 218 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 ARHGAP12Q8IWW6 846 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 LGI2Q8N0V4 545 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 RIBC1Q8N443 379 aaPredicted RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 MDM1Q8TC05 714 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 FBF1Q8TES7 1133 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 RPRD1AQ96P16 312 aaPredicted RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 CNOT10Q9H9A5 744 aaKnown RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 TBK1Q9UHD2 729 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 PRRC2BQ5JSZ5 2229 aaKnown RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 F5H5T6 163 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 POC1B-GALNT4F8VUJ3 575 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 LEFTY2O00292 366 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 FGF10O15520 208 aaPredicted RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 TBX10O75333 385 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 ZNF189O75820 626 aaPredicted RBP14.8□□□□□ -0.04
CLN8-204ENST00000519254 PRAMEF12O95522 483 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 CREB1P16220 341 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 PFKLP17858 780 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 PSMB4P28070 264 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 LSP1P33241 339 aa14.8□□□□□ -0.04
CLN8-204ENST00000519254 DLX2Q07687 328 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms