RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 KDELC2Q7Z4H8 507 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 USP37Q86T82 979 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 LURAP1LQ8IV03 231 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 CHST13Q8NET6 341 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 ZNF764Q96H86 408 aaPredicted RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 ABHD1Q96SE0 405 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 TP63Q9H3D4 680 aaPredicted RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 TNFRSF12AQ9NP84 129 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 C19orf73Q9NVV2 129 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 TBX20Q9UMR3 447 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 PCDHB7Q9Y5E2 793 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 COL2A1P02458 1487 aaPredicted RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 E7EWF7 191 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 MTSS1O43312 755 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 TPH1P17752 444 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 CASTP20810 708 aaKnown RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 TGM1P22735 817 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 RPS12P25398 132 aaKnown RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 TOB1P50616 345 aaPredicted RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 RNASE9P60153 205 aaKnown RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 TNIP1Q15025 636 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 SYCP1Q15431 976 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 Q4G0T1 1027 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 SLC44A4Q53GD3 710 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 FAXCQ5TGI0 409 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 ZNF529Q6P280 563 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 BLOC1S2Q6QNY1 142 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 STOX1Q6ZVD7 989 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 CATSPER4Q7RTX7 472 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 RASGRP3Q8IV61 690 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 NETO2Q8NC67 525 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 SDR42E1Q8WUS8 393 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 BCL7CQ8WUZ0 217 aaPredicted RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 TMEM171Q8WVE6 324 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 CTNNBL1Q8WYA6 563 aaPredicted RBP7.58□□□□□ -1.2
CLK4-202ENST00000519132 HTATIP2Q9BUP3 242 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 C5AR2Q9P296 337 aa7.58□□□□□ -1.2
CLK4-202ENST00000519132 KIF2AO00139 706 aaPredicted RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 PSMD14O00487 310 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 MXI1P50539 228 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 NCKAP1LP55160 1127 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 TUBA1BP68363 451 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 CXCL9Q07325 125 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 APOBEC3HQ6NTF7 200 aaKnown RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 TUBA1AQ71U36 451 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 SPRED2Q7Z698 418 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 XYLT1Q86Y38 959 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 WDTC1Q8N5D0 677 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 TEX9Q8N6V9 391 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 SH3RF3Q8TEJ3 882 aaPredicted RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 HMGB4Q8WW32 186 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 ARHGEF2Q92974 986 aaKnown RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 SLC25A32Q9H2D1 315 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 CNTN6Q9UQ52 1028 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 RTCAO00442 366 aaKnown RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 HEXIM1O94992 359 aaKnown RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 ENO2P09104 434 aaPredicted RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 FTH1P19P0C7X4 201 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 ENDOUP21128 410 aaKnown RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 KIR2DL1P43626 348 aaPredicted RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 KIR2DL2P43627 348 aaPredicted RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 PRELPP51888 382 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 RAP2BP61225 183 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 PSMD6Q15008 389 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 ANKRD1Q15327 319 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 WDR72Q3MJ13 1102 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 ABLIM2Q6H8Q1 611 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 MAFAQ8NHW3 353 aaPredicted RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 NCOA7Q8NI08 942 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 C8orf76Q96K31 380 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 TLR10Q9BXR5 811 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 OSBPL1AQ9BXW6 950 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 RNF41Q9H4P4 317 aaPredicted RBP7.57□□□□□ -1.2
CLK4-202ENST00000519132 DERAQ9Y315 318 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 SIPA1L1O43166 1804 aa7.57□□□□□ -1.2
CLK4-202ENST00000519132 A0A1W2PQ09 198 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 NPIPB15A6NHN6 443 aaPredicted RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 PEX12O00623 359 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 DCLK1O15075 740 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 HNRNPRO43390 633 aaKnown RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 F9P00740 461 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 ERBB2P04626 1255 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 CD72P21854 359 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 CHMP24386 653 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 GCKP35557 465 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 SCML4Q8N228 414 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 DTX3Q8N9I9 347 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 ELP4Q96EB1 424 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 CNDP2Q96KP4 475 aaKnown RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 CCDC114Q96M63 670 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 HOMER3Q9NSC5 361 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 COQ3Q9NZJ6 369 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 FITM1A5D6W6 292 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 C2orf78A6NCI8 922 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 CYP26A1O43174 497 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 KLHL41O60662 606 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 STC2O76061 302 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 UBL4AP11441 157 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 KRT17Q04695 432 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms