RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 ALKAL1Q6UXT8 129 aa16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 KCNMB4Q86W47 210 aa16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 VPS39Q96JC1 886 aa16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 CNDP1Q96KN2 507 aa16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 ACE2Q9BYF1 805 aaPredicted RBP16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 ILKAPQ9H0C8 392 aaPredicted RBP16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 IARS2Q9NSE4 1012 aaKnown RBP16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 BFARQ9NZS9 450 aa16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 COL1A2P08123 1366 aa16.88■□□□□ 0.29
PCDHGA11-202ENST00000518882 RGSL1A5PLK6 1076 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 H3BRB1 525 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 PIRO00625 290 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 XPO1O14980 1071 aaKnown RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 GRID2O43424 1007 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 AP1G1O43747 822 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 THRAP10827 490 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 TPH1P17752 444 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 ERCC2P18074 760 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 DPP6P42658 865 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 RPS6KA3P51812 740 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 DYNC1I2Q13409 638 aaKnown RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 LSAMPQ13449 338 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 GRIK4Q16099 956 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 SLC27A1Q6PCB7 646 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 NPWQ8N729 165 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 PPTC7Q8NI37 304 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 SLC16A10Q8TF71 515 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 PPP1R13LQ8WUF5 828 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 RCN3Q96D15 328 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 CDRT15Q96T59 188 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 NUF2Q9BZD4 464 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 SNX25Q9H3E2 840 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 C20orf96Q9NUD7 363 aaPredicted RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 SETD4Q9NVD3 440 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 KLK14Q9P0G3 267 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 C6orf203Q9P0P8 240 aaPredicted RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 COMMD3-BMI1R4GMX3 469 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 LTBP3Q9NS15 1303 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 CCDC78A2IDD5 438 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 ADM5C9JUS6 153 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 DNAJA2O60884 412 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 CYP2B6P20813 491 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 NOS2P35228 1153 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 GRIA4P48058 902 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 RABGGTBP53611 331 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 PKNOX1P55347 436 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 RPL26P61254 145 aaKnown RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 MS4A2Q01362 244 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 ZBTB17Q13105 803 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 GRM3Q14832 879 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 ZNF423Q2M1K9 1284 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 PIGGQ5H8A4 983 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 ARL13AQ5H913 290 aaPredicted RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 RNF148Q8N7C7 305 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 C1QTNF1Q9BXJ1 281 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 OCEL1Q9H607 264 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 TASP1Q9H6P5 420 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 PRDM16Q9HAZ2 1276 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 CLIC5Q9NZA1 410 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 ZDHHC2Q9UIJ5 367 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 SLC39A10Q9ULF5 831 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 PRPF19Q9UMS4 504 aaKnown RBP16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 RAP2CQ9Y3L5 183 aa16.87■□□□□ 0.29
PCDHGA11-202ENST00000518882 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 HDAC3O15379 428 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 PIGNO95427 931 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 SAT1P21673 171 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 NMBRP28336 390 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 PMLP29590 882 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 ADCYAP1R1P41586 468 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 CSRP3P50461 194 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 CEACAM7Q14002 265 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 SEL1L3Q68CR1 1132 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 MOB2Q70IA6 237 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 LILRA2Q8N149 483 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 MARVELD2Q8N4S9 558 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 KYQ8NBH2 561 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 USP13Q92995 863 aaPredicted RBP16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 MARK4Q96L34 752 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 CATSPER2Q96P56 530 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 NDNQ99608 321 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 DRC3Q9H069 523 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 ZNF385DQ9H6B1 395 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 UBP1Q9NZI7 540 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 STX16-NPEPL1H3BU86 382 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 PHGDHO43175 533 aaKnown RBP16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 DENRO43583 198 aaKnown RBP16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 TIMM44O43615 452 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 TFEBP19484 476 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 GLRBP48167 497 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 RPL14P50914 215 aaKnown RBP16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 ATXN3P54252 364 aaPredicted RBP16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 SOX4Q06945 474 aaPredicted RBP16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 FLOT2Q14254 428 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 GK3PQ14409 553 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 C16orf89Q6UX73 402 aa16.86■□□□□ 0.29
PCDHGA11-202ENST00000518882 BNC2Q6ZN30 1099 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms