RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TMCO4Q5TGY1 634 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 RFWD3Q6PCD5 774 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 ARHGAP36Q6ZRI8 547 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 SPRED2Q7Z698 418 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 LINC00523Q86TU6 105 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 CAND1Q86VP6 1230 aaKnown RBP15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 ZNF354CQ86Y25 554 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 CCNJLQ8IV13 435 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 KLHDC8BQ8IXV7 354 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 BBS5Q8N3I7 341 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 RIBC1Q8N443 379 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 FBXO36Q8NEA4 188 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 ZSCAN18Q8TBC5 510 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 PPP2R3CQ969Q6 453 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 PGM2Q96G03 612 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 AGAP3Q96P47 875 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 FCRL5Q96RD9 977 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 SLC22A12Q96S37 553 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 CYP2S1Q96SQ9 504 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 CDCA3Q99618 268 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 GDF15Q99988 308 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 PBX4Q9BYU1 374 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 CEP41Q9BYV8 373 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 LRRC40Q9H9A6 602 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 VPS37BQ9H9H4 285 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 GLOD4Q9HC38 313 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 LRRC4CQ9HCJ2 640 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 RBM22Q9NW64 420 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 FETUBQ9UGM5 382 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 TEX264Q9Y6I9 313 aa15.38■□□□□ 0.05
TRAPPC9-205ENST00000518839 RFPL2O75678 378 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 CPP00450 1065 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 RHOP08100 348 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 RHOCP08134 193 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 CD68P34810 354 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 AVPR1AP37288 418 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 ELK3P41970 407 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 GEMP55040 296 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 GNA12Q03113 381 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 SERINC3Q13530 473 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 DUSP6Q16828 381 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 MSS51Q4VC12 460 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 GPR158Q5T848 1215 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 MARC1Q5VT66 337 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 PPP2R2DQ66LE6 453 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 NAPEPLDQ6IQ20 393 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 ANKMY2Q8IV38 441 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 CFAP52Q8N1V2 620 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 TEX26Q8N6G2 289 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 SHKBP1Q8TBC3 707 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 ADAMTS19Q8TE59 1207 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 PRICKLE1Q96MT3 831 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 NAT9Q9BTE0 207 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 NKX2-4Q9H2Z4 354 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 DNMT3BQ9UBC3 853 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 TBC1D30Q9Y2I9 924 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 HCFC2Q9Y5Z7 792 aa15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-205ENST00000518839 NUP210Q8TEM1 1887 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 E2F8A0AVK6 867 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 GREM1O60565 184 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 PRAMEF11O60813 436 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 PAPLNO95428 1278 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 MMP13P45452 471 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 OXCT1P55809 520 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 RPS24P62847 133 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 FASTKD3Q14CZ7 662 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 KLHL38Q2WGJ6 581 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 TTMPQ5BVD1 217 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 MPP7Q5T2T1 576 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 KCTD11Q693B1 232 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 ZNF534Q76KX8 674 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 CIR1Q86X95 450 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 CCDC117Q8IWD4 279 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 CMTM8Q8IZV2 173 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 CNTD1Q8N815 330 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 UHMK1Q8TAS1 419 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 FAM76AQ8TAV0 307 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 USP33Q8TEY7 942 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 ARHGEF2Q92974 986 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 WBP2Q969T9 261 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 ARL8AQ96BM9 186 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 TMA16Q96EY4 203 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 MYEOVQ96EZ4 313 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 SLC46A2Q9BY10 475 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 CENPHQ9H3R5 247 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 TLE6Q9H808 572 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 SLC28A3Q9HAS3 691 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 DZANK1Q9NVP4 752 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 HCFC1R1Q9NWW0 138 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 VPS18Q9P253 973 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 CFAP97Q9P2B7 532 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 CHMP2BQ9UQN3 213 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 NOTCH4Q99466 2003 aa15.36■□□□□ 0.05
TRAPPC9-205ENST00000518839 MIA3Q5JRA6 1907 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 EXOC1LA0A1B0GW35 172 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 TLDC2A0PJX2 215 aa15.35■□□□□ 0.05
TRAPPC9-205ENST00000518839 SDR42E2A6NKP2 422 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms