RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 MTMR11A4FU01 709 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 CFAP73A6NFT4 308 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 CXorf49A8MYA2 514 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ATP9BO43861 1147 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 B4GALT3O60512 393 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 NBNO60934 754 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 FAM155BO75949 473 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 USP1O94782 785 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 RHOQP17081 205 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 FGFR3P22607 806 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 HOXC13P31276 330 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 SPRP35270 261 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 GRIA1P42261 906 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 SERPINB4P48594 390 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ALDH7A1P49419 539 aaKnown RBP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 GPR15P49685 360 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 GATMP50440 423 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 TMPRSS15P98073 1019 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ZBTB16Q05516 673 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ITKQ08881 620 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ZBTB17Q13105 803 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 SEPT6Q14141 434 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 SHHQ15465 462 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 TRIM60Q495X7 471 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 C9orf50Q5SZB4 431 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 GRTP1Q5TC63 336 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 TRMT10BQ6PF06 316 aaKnown RBP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 CYS1Q717R9 158 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 SCD5Q86SK9 330 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 MIB1Q86YT6 1006 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 AGGF1Q8N302 714 aaeCLIP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 BBS5Q8N3I7 341 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 PDZD8Q8NEN9 1154 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 IPMKQ8NFU5 416 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 RAB3IL1Q8TBN0 382 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ZNF398Q8TD17 642 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 MZB1Q8WU39 189 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 CCT6BQ92526 530 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 BTN2A3PQ96KV6 586 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 TEKT5Q96M29 485 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 CASD1Q96PB1 797 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 FICDQ9BVA6 458 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 PPP1R12CQ9BZL4 782 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 SLC13A1Q9BZW2 595 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 NMUR1Q9HB89 426 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 RXFP1Q9HBX9 757 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 CASS4Q9NQ75 786 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 ANLNQ9NQW6 1124 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 C20orf96Q9NUD7 363 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 CLIC5Q9NZA1 410 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 MID2Q9UJV3 735 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 NUDT5Q9UKK9 219 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 MAGED2Q9UNF1 606 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-204ENST00000517824 GBF1Q92538 1859 aa10.98□□□□□ -0.65
SPIDR-204ENST00000517824 HELZP42694 1942 aaKnown RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 DENND4CQ5VZ89 1909 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 TRIM43BA6NCK2 446 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 KCNU1A8MYU2 1149 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 TIMM44O43615 452 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 USP12O75317 370 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 DNAJC8O75937 253 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 ATP5HO75947 161 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 HMBSP08397 361 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 TYK2P29597 1187 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 NDST2P52849 883 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 NIPAL4Q0D2K0 466 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 GPR17Q13304 367 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 VEPH1Q14D04 833 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 PSMD5Q16401 504 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 DBN1Q16643 649 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 UGP2Q16851 508 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 TAF1BQ53T94 588 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 PDPK2PQ6A1A2 396 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 KYAT3Q6YP21 454 aaKnown RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 DEFB128Q7Z7B8 93 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 KCNMB4Q86W47 210 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 NUDCD3Q8IVD9 361 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 ATAD1Q8NBU5 361 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 STKLD1Q8NE28 680 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 PPP4R1Q8TF05 950 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 BADQ92934 168 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 TRIM43Q96BQ3 446 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 THOC1Q96FV9 657 aaKnown RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 SPATA17Q96L03 361 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 RAB3IPQ96QF0 476 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 APOL2Q9BQE5 337 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 ECT2Q9H8V3 914 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 GLOD4Q9HC38 313 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 ABCF3Q9NUQ8 709 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 RBM22Q9NW64 420 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 PRKAG2Q9UGJ0 569 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 IPO11Q9UI26 975 aaKnown RBP10.97□□□□□ -0.65
SPIDR-204ENST00000517824 GRID1Q9ULK0 1009 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
SPIDR-204ENST00000517824 HS3ST4Q9Y661 456 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms