RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 RTN3O95197 1032 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 RHOCP08134 193 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 UQCRBP14927 111 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 HIRAP54198 1017 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 CDC16Q13042 620 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 STX5Q13190 355 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 ARCQ7LC44 396 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TUBGCP5Q96RT8 1024 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TKTL2Q9H0I9 626 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 SPATA31C2B4DYI2 1134 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 VPS26AO75436 327 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 MAFO75444 373 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 CST3P01034 146 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 GM2AP17900 193 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 RHOAP61586 193 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 SETD3Q86TU7 594 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZNF410Q86VK4 478 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 SEPT8Q92599 483 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 LRRC39Q96DD0 335 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 PRR11Q96HE9 360 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 CNDP1Q96KN2 507 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 YME1L1Q96TA2 773 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 APBA2Q99767 749 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 TCF7L2Q9NQB0 619 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 GID8Q9NWU2 228 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 NCKIPSDQ9NZQ3 722 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 SPASTQ9UBP0 616 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 SLC7A8Q9UHI5 535 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 EFR3BQ9Y2G0 817 aa11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA1-202ENST00000517417 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 NCAM2O15394 837 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 RAMP2O60895 175 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 LTFP02788 710 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 HSPA13P48723 471 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 PLK1P53350 603 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 FKBP1BP68106 108 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 MRPS22P82650 360 aaKnown RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 BFSP2Q13515 415 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 TAF5Q15542 800 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 C16orf87Q6PH81 154 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 ACO2Q99798 780 aaKnown RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 STRA6Q9BX79 667 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 CIPCQ9C0C6 399 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 ARHGAP28Q9P2N2 729 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 YDJCA8MPS7 323 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 BIRC5O15392 142 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 FAM58BPP0C7Q3 252 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 TBX4P57082 545 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 CDH17Q12864 832 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 CNPY1Q3B7I2 92 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 SLC39A12Q504Y0 691 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 KYQ8NBH2 561 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 FAM81AQ8TBF8 368 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 FBXL18Q96ME1 805 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 RNF157Q96PX1 679 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 C17orf80Q9BSJ5 609 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 TNFSF13BQ9Y275 285 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 KIAA1551Q9HCM1 1747 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 TTLL13PA6NNM8 815 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 H7C4K7 107 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF862O60290 1169 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 GLP2RO95838 553 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 URODP06132 367 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 PSMC3P17980 439 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 MZF1P28698 734 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 GP5P40197 560 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 OGDHQ02218 1023 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF470Q6ECI4 717 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 UNC5AQ6ZN44 842 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 PIGZQ86VD9 579 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 SNX32Q86XE0 403 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 EZH1Q92800 747 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 SKA1Q96BD8 255 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 PRPF18Q99633 342 aaKnown RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 RNPEPQ9H4A4 650 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 COPS7BQ9H9Q2 264 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 EFCAB1Q9HAE3 211 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 PNPOQ9NVS9 261 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 TMEM161AQ9NX61 479 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 SCHIP1Q9P0W5 487 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 ATP11BQ9Y2G3 1177 aa11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 FAM32AQ9Y421 112 aaKnown RBP11.02□□□□□ -0.65
PCDHGA1-202ENST00000517417 MYH11P35749 1972 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 A0A096LPK6 155 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 SERPINF2P08697 491 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 VAV1P15498 845 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PTPN1P18031 435 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ITGB6P18564 788 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ACTR3P61158 418 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 FOLH1Q04609 750 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ACAP1Q15027 740 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 NOMO1Q15155 1222 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 C11orf96Q7Z7L8 435 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 KLRG1Q96E93 195 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms