RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 FOSP01100 380 aaPredicted RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 THP07101 528 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 PLEKP08567 350 aaPredicted RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 OR4Q2P0C623 313 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 PDIA4P13667 645 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 IFNAR1P17181 557 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 PDIA3P30101 505 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 ETV3P41162 512 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CLCNKBP51801 687 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 OVGP1Q12889 678 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CAPRIN1Q14444 709 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 RABEP1Q15276 862 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 UPP1Q16831 310 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 KLHL40Q2TBA0 621 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 TDRD12Q587J7 1177 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 LY6G5CQ5SRR4 150 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 FCRL6Q6DN72 434 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 GALNT17Q6IS24 598 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF280DQ6N043 979 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 SWSAP1Q6NVH7 229 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CPLX2Q6PUV4 134 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 Q6ZUG5 572 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 TMTC3Q6ZXV5 915 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 STRADAQ7RTN6 431 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 REC114Q7Z4M0 266 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 RHPN2Q8IUC4 686 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 HSCBQ8IWL3 235 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 SRBD1Q8N5C6 995 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 TAB3Q8N5C8 712 aaPredicted RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 ATAD1Q8NBU5 361 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 KIAA0895Q8NCT3 520 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC112Q8NEF3 446 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF548Q8NEK5 533 aaPredicted RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC12Q8WUD4 166 aaPredicted RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 ZFAND2BQ8WV99 257 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 BRF1Q92994 677 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 GTF3C6Q969F1 213 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC127Q96BQ5 260 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC51Q96ER9 411 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 ZBED6CLQ96FA7 236 aaPredicted RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 ZSCAN31Q96LW9 406 aaPredicted RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 SDF4Q9BRK5 362 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 LLPHQ9BRT6 129 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 BOCQ9BWV1 1114 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 UCK2Q9BZX2 261 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 TTYH3Q9C0H2 523 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CXCL16Q9H2A7 254 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 SH3GLB2Q9NR46 395 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 PDRG1Q9NUG6 133 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 PTGFRNQ9P2B2 879 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 SEC63Q9UGP8 760 aaKnown RBP3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 UBIAD1Q9Y5Z9 338 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 DMBT1Q9UGM3 2413 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CADP27708 2225 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CITO14578 2027 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 MYH10P35580 1976 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 DNAH7Q8WXX0 4024 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 TRAV19A0A0A6YYK7 116 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 KLF18A0A0U1RQI7 1052 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 SSU72P8A0A1W2PR75 194 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC12A8A0AV02 714 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 LEFTY2O00292 366 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CYTH3O43739 400 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 PFKFB2O60825 505 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 TADA3O75528 432 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 STK17BO94768 372 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF202O95125 648 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 BAG4O95429 457 aaKnown RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 RECKO95980 971 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 DNTTP04053 509 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 COL6A2P12110 1019 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 HMGA1P17096 107 aaKnown RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 XBP1P17861 261 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ATF6P18850 670 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 PTMSP20962 102 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 GNA11P29992 359 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CHRNA3P32297 505 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 PTGIRP43119 386 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 TSFMP43897 325 aaKnown RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 NASPP49321 788 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CCR5P51681 352 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 NEK4P51957 841 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CDC16Q13042 620 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 GPR17Q13304 367 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ITGB3BPQ13352 177 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ENPP2Q13822 863 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 TOB2Q14106 344 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 SQLEQ14534 574 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 STAT4Q14765 748 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 VEPH1Q14D04 833 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 NTRK3Q16288 839 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 RTN1Q16799 776 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 PFKFB3Q16875 520 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 POM121L1PQ3SYA9 428 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 DMRTC1Q5HYR2 192 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 GARNL3Q5VVW2 1013 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 RINT1Q6NUQ1 792 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ESRP1Q6NXG1 681 aaKnown RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 IGFL3Q6UXB1 125 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 LYSMD3Q7Z3D4 306 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms