RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 INAVAQ3KP66 663 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 C2CD6Q53TS8 623 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 TRIM72Q6ZMU5 477 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 Q6ZVU0 165 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 BNIPLQ7Z465 357 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 BAHD1Q8TBE0 780 aaPredicted RBP17.94■□□□□ 0.46
DDX41-217ENST00000515562 SLC20A1Q8WUM9 679 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 ADAMTS14Q8WXS8 1223 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 CFAP57Q96MR6 1250 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 HAPLN3Q96S86 360 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 FANCLQ9NW38 375 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 KLK13Q9UKR3 277 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 FRYQ5TBA9 3013 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 FAM170AA1A519 330 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 FAM221BA6H8Z2 402 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 DRGXA6NNA5 263 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 E9PAM4 449 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 MCF2LO15068 1137 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 PCDHGA12O60330 932 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 CYP1A1P04798 512 aaPredicted RBP17.93■□□□□ 0.46
DDX41-217ENST00000515562 MMP8P22894 467 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 GRK6P43250 576 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 KLK7P49862 253 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 CLCN6P51797 869 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 FMO1Q01740 532 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 TRNP1Q6NT89 227 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 ZNF783Q6ZMS7 281 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 CHCHD4Q8N4Q1 142 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 KDF1Q8NAX2 398 aaPredicted RBP17.93■□□□□ 0.46
DDX41-217ENST00000515562 NLRC4Q9NPP4 1024 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 AASDHPPTQ9NRN7 309 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 METTL5Q9NRN9 209 aaKnown RBP17.93■□□□□ 0.46
DDX41-217ENST00000515562 VPS51Q9UID3 782 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 PPM1HQ9ULR3 514 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 SIK3Q9Y2K2 1263 aa17.93■□□□□ 0.46
DDX41-217ENST00000515562 FARP1Q9Y4F1 1045 aaPredicted RBP17.93■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3DA0A087WVF3 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3IA0A087WXS9 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3EA0A087X179 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3KA0A087X1G2 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3FA6NER0 549 aaPredicted RBP17.92■□□□□ 0.46
DDX41-217ENST00000515562 LGALS16A8MUM7 142 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3LB9A6J9 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 H0Y8X5 98 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 EPHB6O15197 1021 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 LATO43561 262 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 PLRG1O43660 514 aaKnown RBP17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3HP0C7X1 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 SRCP12931 536 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 CD38P28907 300 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 OR1E1P30953 314 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 NUDT1P36639 197 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 STAT1P42224 750 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 COPB1P53618 953 aaKnown RBP17.92■□□□□ 0.46
DDX41-217ENST00000515562 SLC45A4Q5BKX6 768 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3GQ6DHY5 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3CQ6IPX1 549 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.92■□□□□ 0.46
DDX41-217ENST00000515562 TFAP2DQ7Z6R9 452 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 FAM131BQ86XD5 332 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 TBC1D3Q8IZP1 549 aaPredicted RBP17.92■□□□□ 0.46
DDX41-217ENST00000515562 ATP11CQ8NB49 1132 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 PIP4K2CQ8TBX8 421 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 RHBDD1Q8TEB9 315 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 SERAC1Q96JX3 654 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 PSMB7Q99436 277 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 ZYG11BQ9C0D3 744 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 MPP6Q9NZW5 540 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 SNX10Q9Y5X0 201 aa17.92■□□□□ 0.46
DDX41-217ENST00000515562 DOCK4Q8N1I0 1966 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 SNAP91O60641 907 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 MBD3O95983 291 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 SDC4P31431 198 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 NSFP46459 744 aaKnown RBP17.91■□□□□ 0.46
DDX41-217ENST00000515562 METAP1P53582 386 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 PPP2CBP62714 309 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 PPP2CAP67775 309 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 SYCP1Q15431 976 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 ARL13BQ3SXY8 428 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 KCNT1Q5JUK3 1230 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 AGBL4Q5VU57 503 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 EMC1Q8N766 993 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 NEK11Q8NG66 645 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 PCMTD1Q96MG8 357 aaPredicted RBP17.91■□□□□ 0.46
DDX41-217ENST00000515562 C11orf70Q9BRQ4 267 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 EBF2Q9HAK2 575 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 TMPRSS4Q9NRS4 437 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 PPARGC1AQ9UBK2 798 aaKnown RBP17.91■□□□□ 0.46
DDX41-217ENST00000515562 LIMA1Q9UHB6 759 aaKnown RBP17.91■□□□□ 0.46
DDX41-217ENST00000515562 SARDHQ9UL12 918 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 ZMIZ1Q9ULJ6 1067 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 ASPMQ8IZT6 3477 aa17.91■□□□□ 0.46
DDX41-217ENST00000515562 A0A0D9SEW6 157 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 A0A1B0GTQ1 180 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 ILVBLA1L0T0 632 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 YKT6O15498 198 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 BNIP3LO60238 219 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 SRGAP2O75044 1071 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 RTN2O75298 545 aa17.9■□□□□ 0.46
DDX41-217ENST00000515562 ENDOD1O94919 500 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms