RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MCF2LO15068 1137 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 VILLO15195 856 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 TOP3BO95985 862 aaKnown RBP14.01□□□□□ -0.17
TCOF1-215ENST00000515516 CCDC172P0C7W6 258 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 MMP8P22894 467 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 RECQLP46063 649 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-215ENST00000515516 CCT8P50990 548 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 FMO1Q01740 532 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 INAVAQ3KP66 663 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 UNQ6494/PRO21346Q6UXR6 183 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 ZNF783Q6ZMS7 281 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 Q6ZVU0 165 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 PHLDB2Q86SQ0 1253 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 EMC1Q8N766 993 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 SLC30A5Q8TAD4 765 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 PIP4K2CQ8TBX8 421 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 RXFP2Q8WXD0 754 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 SERAC1Q96JX3 654 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 SLC6A18Q96N87 628 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 C11orf70Q9BRQ4 267 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 ZYG11BQ9C0D3 744 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 KDM4CQ9H3R0 1056 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 ANLNQ9NQW6 1124 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 DYRK4Q9NR20 520 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 ADAM22Q9P0K1 906 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 PPM1HQ9ULR3 514 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 WASF3Q9UPY6 502 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 HS3ST2Q9Y278 367 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 SLCO1B1Q9Y6L6 691 aa14.01□□□□□ -0.17
TCOF1-215ENST00000515516 GON4LQ3T8J9 2241 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CKAP5Q14008 2032 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 IGLV3-10A0A075B6K4 115 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 ILVBLA1L0T0 632 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 ANKRD62A6NC57 917 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 KCNK3O14649 394 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 EPHB6O15197 1021 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 SNAP91O60641 907 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CALB1P05937 261 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 FTH1P19P0C7X4 201 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 KRT3P12035 628 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 SRCP12931 536 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CHRNB2P17787 502 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CD38P28907 300 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 NUDT1P36639 197 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CTSKP43235 329 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CLCN6P51797 869 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CDO1Q16878 200 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 POM121L1PQ3SYA9 428 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 RETSATQ6NUM9 610 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 LAYNQ6UX15 382 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 ZNF683Q8IZ20 524 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 CHCHD4Q8N4Q1 142 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 DCAF4L2Q8NA75 395 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 SELENOOQ9BVL4 669 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 TMPRSS4Q9NRS4 437 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 PPARGC1AQ9UBK2 798 aaKnown RBP14□□□□□ -0.17
TCOF1-215ENST00000515516 VPS51Q9UID3 782 aa14□□□□□ -0.17
TCOF1-215ENST00000515516 MUC22E2RYF6 1773 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-215ENST00000515516 A0A0D9SEW6 157 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 TMEM8BA6NDV4 472 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 LRRC10BA6NIK2 292 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 C1QTNF9BB2RNN3 333 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 H0Y8X5 98 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 I6L893 689 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-215ENST00000515516 CBX4O00257 560 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 CBFA2T3O75081 653 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 RTN2O75298 545 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 ENDOD1O94919 500 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 MT-CO1P00395 513 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 PRNPP04156 253 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 C1QTNF9P0C862 333 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 DESP17661 470 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 CHRNA3P32297 505 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 ADRA1BP35368 520 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 DRD3P35462 400 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 GRK6P43250 576 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 TYRO3Q06418 890 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 SLC20A2Q08357 652 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 CNTN1Q12860 1018 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 CLEC16AQ2KHT3 1053 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 CCDC14Q49A88 953 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 TRNP1Q6NT89 227 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 RWDD4Q6NW29 188 aaKnown RBP13.99□□□□□ -0.17
TCOF1-215ENST00000515516 BNIPLQ7Z465 357 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 GLRX5Q86SX6 157 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 AOPEPQ8N6M6 819 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 PSMB7Q99436 277 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 ORAI3Q9BRQ5 295 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 RETREG1Q9H6L5 497 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 ATP13A1Q9HD20 1204 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 GDF3Q9NR23 364 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 OR12D3Q9UGF7 316 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 SARDHQ9UL12 918 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 MSRB2Q9Y3D2 182 aa13.99□□□□□ -0.17
TCOF1-215ENST00000515516 PCDH15Q96QU1 1955 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 C2CD4BA6NLJ0 364 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 SMTNL1A8MU46 457 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 K7ERQ8 282 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 PLK4O00444 970 aa13.98□□□□□ -0.17
TCOF1-215ENST00000515516 KPNA3O00505 521 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms