RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 DDX20Q9UHI6 824 aaKnown RBP4.04□□□□□ -1.76
NEDD4-211ENST00000514893 SLC12A4Q9UP95 1085 aa4.04□□□□□ -1.76
NEDD4-211ENST00000514893 FRMPD2Q68DX3 1309 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-211ENST00000514893 RPL15P61313 204 aaKnown RBP4.03□□□□□ -1.76
NEDD4-211ENST00000514893 RHAGQ02094 409 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 ZNF284Q2VY69 593 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 KLHDC7AQ5VTJ3 777 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 CD101Q93033 1021 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 BICD1Q96G01 975 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 HIPK3Q9H422 1215 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 GAREM1Q9H706 876 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 MALT1Q9UDY8 824 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 CORO2BQ9UQ03 480 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 GAB2Q9UQC2 676 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 PCDHAC2Q9Y5I4 1007 aa4.03□□□□□ -1.76
NEDD4-211ENST00000514893 LOC105369274A0A096LPK9 316 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 LOC102723532A0A0G2JNH3 316 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 EYA2O00167 538 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 HLA-DQA2P01906 255 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 UNGP13051 313 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-211ENST00000514893 HOXB9P17482 250 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-211ENST00000514893 THPOP40225 353 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 CYP2J2P51589 502 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 ZNF543Q08ER8 600 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 HDAC1Q13547 482 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-211ENST00000514893 GDPD4Q6W3E5 623 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 TRMT1LQ7Z2T5 733 aaKnown RBP4.02□□□□□ -1.77
NEDD4-211ENST00000514893 TMEM200AQ86VY9 491 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 ZDHHC23Q8IYP9 409 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 OR4N4Q8N0Y3 316 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 TMEM217Q8N7C4 229 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 ZNF485Q8NCK3 441 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 STAG1Q8WVM7 1258 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 FSCN3Q9NQT6 498 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 RGL1Q9NZL6 768 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 PCDHGB6Q9Y5F9 930 aa4.02□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3DA0A087WVF3 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3IA0A087WXS9 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3EA0A087X179 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3KA0A087X1G2 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 C17orf102A2RUQ5 167 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3BA6NDS4 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3FA6NER0 549 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-211ENST00000514893 POM121BA6NF01 834 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3LB9A6J9 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 PRAC2D3DTV9 90 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TULP2O00295 520 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TMCC1O94876 653 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 CER1O95813 267 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3HP0C7X1 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 PHEXP78562 749 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 ST3GAL1Q11201 340 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 ZNF569Q5MCW4 686 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3GQ6DHY5 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3CQ6IPX1 549 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 MYPOPQ86VE0 399 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-211ENST00000514893 TBC1D3Q8IZP1 549 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-211ENST00000514893 SPATA20Q8TB22 786 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 REXO5Q96IC2 774 aaKnown RBP4.01□□□□□ -1.77
NEDD4-211ENST00000514893 COLEC11Q9BWP8 271 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.01□□□□□ -1.774e-6■■□□□ 13.6
NEDD4-211ENST00000514893 MMP28Q9H239 520 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 ARL15Q9NXU5 204 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 NFU1Q9UMS0 254 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 NFS1Q9Y697 457 aa4.01□□□□□ -1.77
NEDD4-211ENST00000514893 hCG_2014768A0A024R1R8 64 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 HSPB6O14558 160 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 NTSR2O95665 410 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 OAZ1P54368 228 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 RBM6P78332 1123 aaKnown RBP4□□□□□ -1.77
NEDD4-211ENST00000514893 TROAPQ12815 778 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 MYBPHQ13203 477 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 GRM3Q14832 879 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 CCDC33Q8N5R6 958 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 MAB21L3Q8N8X9 362 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 TEX45Q8NA69 505 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 FAM110DQ8TAY7 271 aaPredicted RBP4□□□□□ -1.77
NEDD4-211ENST00000514893 WDR60Q8WVS4 1066 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 GPATCH3Q96I76 525 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 TXNDC15Q96J42 360 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 TRMT61BQ9BVS5 477 aaKnown RBP4□□□□□ -1.77
NEDD4-211ENST00000514893 EVA1AQ9H8M9 152 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 MAN2B2Q9Y2E5 1009 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 SLC45A1Q9Y2W3 748 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 DTNAQ9Y4J8 743 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 KIF26BQ2KJY2 2108 aa4□□□□□ -1.77
NEDD4-211ENST00000514893 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 A0A0U1RQJ8 604 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-211ENST00000514893 TCRBV7S3A2A0A539 114 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 GOLGA6CA6NDK9 693 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 GOLGA6BA6NDN3 693 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 M0QYT0 321 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 NDST3O95803 873 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 TBX6O95947 436 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-211ENST00000514893 MMP3P08254 477 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 GOLGA6DP0CG33 693 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 KRT5P13647 590 aa3.99□□□□□ -1.77
NEDD4-211ENST00000514893 DGKAP23743 735 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms