RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DLG2Q15700 870 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 DPYSL2Q16555 572 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 C9orf64Q5T6V5 341 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 RFX8Q6ZV50 586 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 SH2D3CQ8N5H7 860 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 FRMD1Q8N878 549 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 PRCCQ92733 491 aaPredicted RBP14.28□□□□□ -0.12
USP46-209ENST00000514536 PTPRN2Q92932 1015 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 ACE2Q9BYF1 805 aaPredicted RBP14.28□□□□□ -0.12
USP46-209ENST00000514536 EPC1Q9H2F5 836 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 NOL6Q9H6R4 1146 aaKnown RBP14.28□□□□□ -0.12
USP46-209ENST00000514536 LUC7LQ9NQ29 371 aaKnown RBP14.28□□□□□ -0.12
USP46-209ENST00000514536 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP46-209ENST00000514536 DMDP11532 3685 aa14.28□□□□□ -0.12
USP46-209ENST00000514536 TARSL2A2RTX5 802 aaKnown RBP14.27□□□□□ -0.12
USP46-209ENST00000514536 PRR23AA6NEV1 266 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 H3BRJ5 948 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 K7ERQ8 282 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 ATP9BO43861 1147 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 VAV1P15498 845 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 ERCC2P18074 760 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 MAN1A1P33908 653 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 ARL4AP40617 200 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 P2RY2P41231 377 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 HCAR3P49019 387 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.12
USP46-209ENST00000514536 ZNF135P52742 658 aaPredicted RBP14.27□□□□□ -0.12
USP46-209ENST00000514536 GSDMDP57764 484 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 MAP7D1Q3KQU3 841 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 RETSATQ6NUM9 610 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 POLNQ7Z5Q5 900 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 KBTBD6Q86V97 674 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 CACUL1Q86Y37 369 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 UMODL1-AS1Q8N2C9 162 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 FAM160A2Q8N612 972 aaPredicted RBP14.27□□□□□ -0.12
USP46-209ENST00000514536 SUMF1Q8NBK3 374 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 FRS2Q8WU20 508 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 HS3ST2Q9Y278 367 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 REXO2Q9Y3B8 237 aaKnown RBP14.27□□□□□ -0.12
USP46-209ENST00000514536 ACTL7AQ9Y615 435 aa14.27□□□□□ -0.12
USP46-209ENST00000514536 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 RASA4BC9J798 803 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 RASA4O43374 803 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 SMAD6O43541 496 aaKnown RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 SRCP12931 536 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 BCKDHBP21953 392 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 AMPD1P23109 780 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 CDH6P55285 790 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 YBEYP58557 167 aaPredicted RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 BYSLQ13895 437 aaKnown RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 KRT81Q14533 505 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 ZNF354CQ86Y25 554 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 STK40Q8N2I9 435 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 ACRBPQ8NEB7 543 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 PCDH18Q9HCL0 1135 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 CD93Q9NPY3 652 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 ITM2CQ9NQX7 267 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 DONSONQ9NYP3 566 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 RAB23Q9ULC3 237 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 SMG5Q9UPR3 1016 aaKnown RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 MAP3K13O43283 966 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 KDELR3O43731 214 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 BNIP3LO60238 219 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 ZNF217O75362 1048 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 ACADMP11310 421 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 ARSEP51690 589 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 RPS14P62263 151 aaKnown RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 ARF5P84085 180 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 SLC20A2Q08357 652 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 MMRN1Q13201 1228 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 DPYSQ14117 519 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 ZFYVE27Q5T4F4 411 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 LEKR1Q6ZMV7 388 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 NETO2Q8NC67 525 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 KCTD6Q8NC69 237 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 HMCESQ96FZ2 354 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 SPACA7Q96KW9 195 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 CSPG4P5Q96PW8 444 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 FAM129BQ96TA1 746 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 SLC39A8Q9C0K1 460 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 KLC2Q9H0B6 622 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 DUSP15Q9H1R2 295 aaPredicted RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 RSPH9Q9H1X1 276 aaPredicted RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 FBRSQ9HAH7 460 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 MBD1Q9UIS9 605 aaPredicted RBP14.26□□□□□ -0.13
USP46-209ENST00000514536 CYP8B1Q9UNU6 501 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 HYOU1Q9Y4L1 999 aa14.26□□□□□ -0.13
USP46-209ENST00000514536 DOCK4Q8N1I0 1966 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 A0A0A6YYK5 440 aaPredicted RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 BUB1BO60566 1050 aaPredicted RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 RNASEH1O60930 286 aaKnown RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 CD160O95971 181 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 KRT7P08729 469 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 CD48P09326 243 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 COMTP21964 271 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 IL4RP24394 825 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms