RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 F11P03951 625 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 POLBP06746 335 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 INHBAP08476 426 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 CREB1P16220 341 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 KRT15P19012 456 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MGAT1P26572 445 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 ELF1P32519 619 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 ADRA1AP35348 466 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SLC11A2P49281 568 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 RENBPP51606 427 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 EPHB3P54753 998 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SLC18A2Q05940 514 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 CDH17Q12864 832 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MPP3Q13368 585 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MPP2Q14168 576 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SLC14A2Q15849 920 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SKIDA1Q1XH10 827 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 PABPC1LQ4VXU2 614 aaKnown RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 TMCO4Q5TGY1 634 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 RAP1GAP2Q684P5 730 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 NADSYN1Q6IA69 706 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 PSRC1Q6PGN9 363 aaPredicted RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 LILRA6Q6PI73 481 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 TIFABQ6ZNK6 161 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 RGS9BPQ6ZS82 235 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SH2D5Q6ZV89 423 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 CHST9Q7L1S5 443 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 DNAJB7Q7Z6W7 309 aaPredicted RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 PRPF39Q86UA1 669 aaKnown RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 TMEM135Q86UB9 458 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MIB1Q86YT6 1006 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SRRM1Q8IYB3 904 aaKnown RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 MPP5Q8N3R9 675 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 FIBCD1Q8N539 461 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 NETO2Q8NC67 525 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 DEPDC1BQ8WUY9 529 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 PTCD2Q8WV60 388 aaKnown RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 CKAP2Q8WWK9 683 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 IGSF8Q969P0 613 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 TADA1Q96BN2 335 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 CFAP36Q96G28 342 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 OXNAD1Q96HP4 312 aaPredicted RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 ZNF512Q96ME7 567 aaPredicted RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 AGAP3Q96P47 875 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 CCT8L2Q96SF2 557 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 YME1L1Q96TA2 773 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 KLF16Q9BXK1 252 aaPredicted RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 IL22Q9GZX6 179 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SLC25A51Q9H1U9 297 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MAGEH1Q9H213 219 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 ARNT2Q9HBZ2 717 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MRM3Q9HC36 420 aaKnown RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 ENTPD7Q9NQZ7 604 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 VPS45Q9NRW7 570 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 NDFIP2Q9NV92 336 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 NKIRAS1Q9NYS0 192 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 BFARQ9NZS9 450 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MPP6Q9NZW5 540 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 TBK1Q9UHD2 729 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MAGED2Q9UNF1 606 aaPredicted RBP8.54□□□□□ -1.04
RNF4-220ENST00000513578 INSL6Q9Y581 213 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 INSL5Q9Y5Q6 135 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 IKBKGQ9Y6K9 419 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 FAM169AQ9Y6X4 670 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 MYLKQ15746 1914 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 CENPFP49454 3210 aa8.54□□□□□ -1.04
RNF4-220ENST00000513578 SOBPA7XYQ1 873 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 C2CD2LO14523 706 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 NDUFAB1O14561 156 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 TM9SF1O15321 606 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 TEX28O15482 410 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 COCHO43405 550 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 KRT38O76015 456 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 STC2O76061 302 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CNTN5O94779 1100 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 ZWINTO95229 277 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 ASMTLO95671 621 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 SNRPAP09012 282 aaKnown RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 ACRP10323 421 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CCNFP41002 786 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 HARS2P49590 506 aaKnown RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 CDH4P55283 916 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 FPGSQ05932 587 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 NIPAL4Q0D2K0 466 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 SERINC3Q13530 473 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CRYMQ14894 314 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 EFTUD2Q15029 972 aaKnown RBP eCLIP8.53□□□□□ -1.047e-7■■■□□ 16.7
RNF4-220ENST00000513578 ALFQ53S48 1182 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 FAM133BQ5BKY9 247 aaKnown RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 RABGAP1LQ5R372 815 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 SYCP2LQ5T4T6 812 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 TTC19Q6DKK2 380 aaPredicted RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 ZNF783Q6ZMS7 281 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 ARHGAP36Q6ZRI8 547 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CAPN12Q6ZSI9 719 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 TMEM150AQ86TG1 271 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CHSY1Q86X52 802 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 BANPQ8N9N5 519 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms