RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TMIEQ8NEW7 156 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 ZNF397Q8NF99 534 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 KLHDC7BQ96G42 594 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 PPP1R13BQ96KQ4 1090 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 C1orf74Q96LT6 269 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 CCDC114Q96M63 670 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 RPRD1AQ96P16 312 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 UBL7Q96S82 380 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-216ENST00000512683 FAM204AQ9H8W3 233 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 KLHL11Q9NVR0 708 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 DDIT4Q9NX09 232 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 HS3ST2Q9Y278 367 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 WDFY3Q8IZQ1 3526 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 ASXL3Q9C0F0 2248 aa12.92□□□□□ -0.34
VEGFA-216ENST00000512683 ITPR1Q14643 2758 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 CXorf51AA0A1B0GTR3 108 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 FAM149AA5PLN7 773 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 PLK4O00444 970 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 WNT9AO14904 365 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 EIF2S3P41091 472 aaKnown RBP12.91□□□□□ -0.34
VEGFA-216ENST00000512683 ABCG1P45844 678 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 STK19P49842 368 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-216ENST00000512683 BPIFB4P59827 614 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 SLC20A2Q08357 652 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.34
VEGFA-216ENST00000512683 ACCSLQ4AC99 568 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 CCDC157Q569K6 752 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 BRMS1LQ5PSV4 323 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 CLEC17AQ6ZS10 378 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 SETD3Q86TU7 594 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-216ENST00000512683 SPATS2Q86XZ4 545 aaKnown RBP12.91□□□□□ -0.34
VEGFA-216ENST00000512683 WDTC1Q8N5D0 677 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 SH2D3CQ8N5H7 860 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 PIP4K2CQ8TBX8 421 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 SHC3Q92529 594 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 BAP1Q92560 729 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 FGF11Q92914 225 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 C2orf49Q9BVC5 232 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-216ENST00000512683 USP29Q9HBJ7 922 aa12.91□□□□□ -0.34
VEGFA-216ENST00000512683 PRNPP04156 253 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 PON1P27169 355 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 KRT9P35527 623 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 SCNN1AP37088 669 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 SLC6A3Q01959 620 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 BNIP3Q12983 259 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 DPCR1Q3MIW9 517 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 AGBL4Q5VU57 503 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 DPY19L2P1Q6NXN4 242 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 CREBRFQ8IUR6 639 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 DCBLD1Q8N8Z6 715 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 TMEM145Q8NBT3 493 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 SNIP1Q8TAD8 396 aaKnown RBP12.9□□□□□ -0.34
VEGFA-216ENST00000512683 PGAP3Q96FM1 320 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-216ENST00000512683 RETREG1Q9H6L5 497 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 WDCPQ9H6R7 721 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 SIX2Q9NPC8 291 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 EVA1BQ9NVM1 165 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 APEX2Q9UBZ4 518 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 VPS28Q9UK41 221 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 AJAP1Q9UKB5 411 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-216ENST00000512683 HS3ST3A1Q9Y663 406 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 AK5Q9Y6K8 562 aa12.9□□□□□ -0.34
VEGFA-216ENST00000512683 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
VEGFA-216ENST00000512683 NEMP2A6NFY4 417 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 CAPN8A6NHC0 703 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 DRGXA6NNA5 263 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 RTN2O75298 545 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 ACTN2P35609 894 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 CXCR3P49682 368 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 PPP2CBP62714 309 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 PPP2CAP67775 309 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 CNTN1Q12860 1018 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 DNAJC3Q13217 504 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 TAF5Q15542 800 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 ARHGAP44Q17R89 818 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 EXOC3L4Q17RC7 722 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 HES3Q5TGS1 186 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 ZNF783Q6ZMS7 281 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 MARCH9Q86YJ5 346 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 LSMEM2Q8N112 164 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 NT5C3BQ969T7 300 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 GRAMD1AQ96CP6 724 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 CPXM1Q96SM3 734 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 HDAC8Q9BY41 377 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 DYRK4Q9NR20 520 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 ARHGEF38Q9NXL2 777 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 SARDHQ9UL12 918 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 VANGL2Q9ULK5 521 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 STAP1Q9ULZ2 295 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 CLCA2Q9UQC9 943 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 HS3ST4Q9Y661 456 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 IGSF10Q6WRI0 2623 aa12.89□□□□□ -0.35
VEGFA-216ENST00000512683 NUMA1Q14980 2115 aa12.88□□□□□ -0.35
VEGFA-216ENST00000512683 GOLGA4Q13439 2230 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms